Gene : Cagra.1472s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Genomic Order:  17
Name:  ? Cagra.1472s0017 Secondary Identifier:  ? PAC:28904814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1472s0017 0.5kb upstream 0.5kb upstream 1771 true Scaffold1472: 68009-69779 Capsella grandiflora
Cagra.1472s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1472: 69280-69779 Capsella grandiflora
Cagra.1472s0017 0.5kb downstream 0.5kb downstream 1771 true Scaffold1472: 67509-69279 Capsella grandiflora
Cagra.1472s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1472: 67509-68008 Capsella grandiflora
Cagra.1472s0017 1.0kb upstream 1.0kb upstream 2271 true Scaffold1472: 68009-70279 Capsella grandiflora
Cagra.1472s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1472: 69280-70279 Capsella grandiflora
Cagra.1472s0017 1.0kb downstream 1.0kb downstream 2271 true Scaffold1472: 67009-69279 Capsella grandiflora
Cagra.1472s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1472: 67009-68008 Capsella grandiflora
Cagra.1472s0017 2.0kb upstream 2.0kb upstream 3271 true Scaffold1472: 68009-71279 Capsella grandiflora
Cagra.1472s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1472: 69280-71279 Capsella grandiflora
Cagra.1472s0017 2.0kb downstream 2.0kb downstream 3271 true Scaffold1472: 66009-69279 Capsella grandiflora
Cagra.1472s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1472: 66009-68008 Capsella grandiflora
Cagra.1472s0017 5.0kb upstream 5.0kb upstream 6271 true Scaffold1472: 68009-74279 Capsella grandiflora
Cagra.1472s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1472: 69280-74279 Capsella grandiflora
Cagra.1472s0017 5.0kb downstream 5.0kb downstream 6271 true Scaffold1472: 63009-69279 Capsella grandiflora
Cagra.1472s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1472: 63009-68008 Capsella grandiflora
Cagra.1472s0017 10.0kb upstream 10.0kb upstream 11271 true Scaffold1472: 68009-79279 Capsella grandiflora
Cagra.1472s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1472: 69280-79279 Capsella grandiflora
Cagra.1472s0017 10.0kb downstream 10.0kb downstream 11271 true Scaffold1472: 58009-69279 Capsella grandiflora
Cagra.1472s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1472: 58009-68008 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370486 5261 Brassicaceae View MSA
123838815 5264 Brassicales-Malvales View MSA
124347002 5266 SBM View MSA
124245609 5268 Malvidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain