Gene : Cagra.1475s0004 C. grandiflora v1.1
Defline:  (1 of 32) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  4
Name:  ? Cagra.1475s0004 Secondary Identifier:  ? PAC:28901842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1475s0004 0.5kb upstream 0.5kb upstream 2406 true Scaffold1475: 5251-7656 Capsella grandiflora
Cagra.1475s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1475: 7157-7656 Capsella grandiflora
Cagra.1475s0004 0.5kb downstream 0.5kb downstream 2406 true Scaffold1475: 4751-7156 Capsella grandiflora
Cagra.1475s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1475: 4751-5250 Capsella grandiflora
Cagra.1475s0004 1.0kb upstream 1.0kb upstream 2906 true Scaffold1475: 5251-8156 Capsella grandiflora
Cagra.1475s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1475: 7157-8156 Capsella grandiflora
Cagra.1475s0004 1.0kb downstream 1.0kb downstream 2906 true Scaffold1475: 4251-7156 Capsella grandiflora
Cagra.1475s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1475: 4251-5250 Capsella grandiflora
Cagra.1475s0004 2.0kb upstream 2.0kb upstream 3906 true Scaffold1475: 5251-9156 Capsella grandiflora
Cagra.1475s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1475: 7157-9156 Capsella grandiflora
Cagra.1475s0004 2.0kb downstream 2.0kb downstream 3906 true Scaffold1475: 3251-7156 Capsella grandiflora
Cagra.1475s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1475: 3251-5250 Capsella grandiflora
Cagra.1475s0004 5.0kb upstream 5.0kb upstream 6906 true Scaffold1475: 5251-12156 Capsella grandiflora
Cagra.1475s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1475: 7157-12156 Capsella grandiflora
Cagra.1475s0004 5.0kb downstream 5.0kb downstream 6906 true Scaffold1475: 251-7156 Capsella grandiflora
Cagra.1475s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1475: 251-5250 Capsella grandiflora
Cagra.1475s0004 10.0kb upstream 10.0kb upstream 11906 true Scaffold1475: 5251-17156 Capsella grandiflora
Cagra.1475s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1475: 7157-17156 Capsella grandiflora
Cagra.1475s0004 10.0kb downstream 10.0kb downstream 7156 true Scaffold1475: 1-7156 Capsella grandiflora
Cagra.1475s0004 10.0kb downstream 10.0kb downstream 5250 false Scaffold1475: 1-5250 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361583 5261 Brassicaceae View MSA
123831437 5264 Brassicales-Malvales View MSA
124338847 5266 SBM View MSA
124254378 5268 Malvidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain