Gene : Cagra.1398s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33349:SF2 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  6
Name:  ? Cagra.1398s0006 Secondary Identifier:  ? PAC:28913510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1398s0006 0.5kb upstream 0.5kb upstream 2154 true Scaffold1398: 17073-19226 Capsella grandiflora
Cagra.1398s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1398: 17073-17572 Capsella grandiflora
Cagra.1398s0006 0.5kb downstream 0.5kb downstream 2154 true Scaffold1398: 17573-19726 Capsella grandiflora
Cagra.1398s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1398: 19227-19726 Capsella grandiflora
Cagra.1398s0006 1.0kb upstream 1.0kb upstream 2654 true Scaffold1398: 16573-19226 Capsella grandiflora
Cagra.1398s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1398: 16573-17572 Capsella grandiflora
Cagra.1398s0006 1.0kb downstream 1.0kb downstream 2654 true Scaffold1398: 17573-20226 Capsella grandiflora
Cagra.1398s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1398: 19227-20226 Capsella grandiflora
Cagra.1398s0006 2.0kb upstream 2.0kb upstream 3654 true Scaffold1398: 15573-19226 Capsella grandiflora
Cagra.1398s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1398: 15573-17572 Capsella grandiflora
Cagra.1398s0006 2.0kb downstream 2.0kb downstream 3654 true Scaffold1398: 17573-21226 Capsella grandiflora
Cagra.1398s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1398: 19227-21226 Capsella grandiflora
Cagra.1398s0006 5.0kb upstream 5.0kb upstream 6654 true Scaffold1398: 12573-19226 Capsella grandiflora
Cagra.1398s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1398: 12573-17572 Capsella grandiflora
Cagra.1398s0006 5.0kb downstream 5.0kb downstream 6654 true Scaffold1398: 17573-24226 Capsella grandiflora
Cagra.1398s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1398: 19227-24226 Capsella grandiflora
Cagra.1398s0006 10.0kb upstream 10.0kb upstream 11654 true Scaffold1398: 7573-19226 Capsella grandiflora
Cagra.1398s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1398: 7573-17572 Capsella grandiflora
Cagra.1398s0006 10.0kb downstream 10.0kb downstream 11654 true Scaffold1398: 17573-29226 Capsella grandiflora
Cagra.1398s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1398: 19227-29226 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369193 5261 Brassicaceae View MSA
123839733 5264 Brassicales-Malvales View MSA
124345876 5266 SBM View MSA
124239802 5268 Malvidae View MSA
124067420 5270 Rosid View MSA
123738359 5271 Pentapetalae View MSA
122791450 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain