Gene : Cagra.1398s0020 C. grandiflora v1.1
Defline:  (1 of 1) KOG1867 - Ubiquitin-specific protease Genomic Order:  20
Name:  ? Cagra.1398s0020 Secondary Identifier:  ? PAC:28913482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1398s0020 0.5kb upstream 0.5kb upstream 2592 true Scaffold1398: 61126-63717 Capsella grandiflora
Cagra.1398s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1398: 61126-61625 Capsella grandiflora
Cagra.1398s0020 0.5kb downstream 0.5kb downstream 2592 true Scaffold1398: 61626-64217 Capsella grandiflora
Cagra.1398s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1398: 63718-64217 Capsella grandiflora
Cagra.1398s0020 1.0kb upstream 1.0kb upstream 3092 true Scaffold1398: 60626-63717 Capsella grandiflora
Cagra.1398s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1398: 60626-61625 Capsella grandiflora
Cagra.1398s0020 1.0kb downstream 1.0kb downstream 3092 true Scaffold1398: 61626-64717 Capsella grandiflora
Cagra.1398s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1398: 63718-64717 Capsella grandiflora
Cagra.1398s0020 2.0kb upstream 2.0kb upstream 4092 true Scaffold1398: 59626-63717 Capsella grandiflora
Cagra.1398s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1398: 59626-61625 Capsella grandiflora
Cagra.1398s0020 2.0kb downstream 2.0kb downstream 4092 true Scaffold1398: 61626-65717 Capsella grandiflora
Cagra.1398s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1398: 63718-65717 Capsella grandiflora
Cagra.1398s0020 5.0kb upstream 5.0kb upstream 7092 true Scaffold1398: 56626-63717 Capsella grandiflora
Cagra.1398s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1398: 56626-61625 Capsella grandiflora
Cagra.1398s0020 5.0kb downstream 5.0kb downstream 7092 true Scaffold1398: 61626-68717 Capsella grandiflora
Cagra.1398s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1398: 63718-68717 Capsella grandiflora
Cagra.1398s0020 10.0kb upstream 10.0kb upstream 12092 true Scaffold1398: 51626-63717 Capsella grandiflora
Cagra.1398s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1398: 51626-61625 Capsella grandiflora
Cagra.1398s0020 10.0kb downstream 10.0kb downstream 12092 true Scaffold1398: 61626-73717 Capsella grandiflora
Cagra.1398s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1398: 63718-73717 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364670 5261 Brassicaceae View MSA
123838412 5264 Brassicales-Malvales View MSA
124345896 5266 SBM View MSA
124249383 5268 Malvidae View MSA
124070704 5270 Rosid View MSA
123736956 5271 Pentapetalae View MSA
122795648 5272 Eudicot View MSA
122047391 5273 Angiosperm View MSA
121345894 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain