Gene : Cagra.1398s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10797:SF14 - CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED Genomic Order:  35
Name:  ? Cagra.1398s0035 Secondary Identifier:  ? PAC:28913516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1398s0035 0.5kb upstream 0.5kb upstream 1979 true Scaffold1398: 112450-114428 Capsella grandiflora
Cagra.1398s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold1398: 112450-112949 Capsella grandiflora
Cagra.1398s0035 0.5kb downstream 0.5kb downstream 1979 true Scaffold1398: 112950-114928 Capsella grandiflora
Cagra.1398s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold1398: 114429-114928 Capsella grandiflora
Cagra.1398s0035 1.0kb upstream 1.0kb upstream 2479 true Scaffold1398: 111950-114428 Capsella grandiflora
Cagra.1398s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold1398: 111950-112949 Capsella grandiflora
Cagra.1398s0035 1.0kb downstream 1.0kb downstream 2479 true Scaffold1398: 112950-115428 Capsella grandiflora
Cagra.1398s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold1398: 114429-115428 Capsella grandiflora
Cagra.1398s0035 2.0kb upstream 2.0kb upstream 3479 true Scaffold1398: 110950-114428 Capsella grandiflora
Cagra.1398s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold1398: 110950-112949 Capsella grandiflora
Cagra.1398s0035 2.0kb downstream 2.0kb downstream 3479 true Scaffold1398: 112950-116428 Capsella grandiflora
Cagra.1398s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold1398: 114429-116428 Capsella grandiflora
Cagra.1398s0035 5.0kb upstream 5.0kb upstream 6479 true Scaffold1398: 107950-114428 Capsella grandiflora
Cagra.1398s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold1398: 107950-112949 Capsella grandiflora
Cagra.1398s0035 5.0kb downstream 5.0kb downstream 6479 true Scaffold1398: 112950-119428 Capsella grandiflora
Cagra.1398s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold1398: 114429-119428 Capsella grandiflora
Cagra.1398s0035 10.0kb upstream 10.0kb upstream 11479 true Scaffold1398: 102950-114428 Capsella grandiflora
Cagra.1398s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold1398: 102950-112949 Capsella grandiflora
Cagra.1398s0035 10.0kb downstream 10.0kb downstream 11479 true Scaffold1398: 112950-124428 Capsella grandiflora
Cagra.1398s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold1398: 114429-124428 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374441 5261 Brassicaceae View MSA
123837045 5264 Brassicales-Malvales View MSA
124344697 5266 SBM View MSA
124249761 5268 Malvidae View MSA
124069772 5270 Rosid View MSA
123751121 5271 Pentapetalae View MSA
122791154 5272 Eudicot View MSA
122043623 5273 Angiosperm View MSA
123429113 5275 Viridiplantae View MSA
121348051 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain