Gene : Cagra.1415s0007 C. grandiflora v1.1
Defline:  (1 of 9) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  7
Name:  ? Cagra.1415s0007 Secondary Identifier:  ? PAC:28904561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1415s0007 0.5kb upstream 0.5kb upstream 2179 true Scaffold1415: 25220-27398 Capsella grandiflora
Cagra.1415s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1415: 26899-27398 Capsella grandiflora
Cagra.1415s0007 0.5kb downstream 0.5kb downstream 2179 true Scaffold1415: 24720-26898 Capsella grandiflora
Cagra.1415s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1415: 24720-25219 Capsella grandiflora
Cagra.1415s0007 1.0kb upstream 1.0kb upstream 2679 true Scaffold1415: 25220-27898 Capsella grandiflora
Cagra.1415s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1415: 26899-27898 Capsella grandiflora
Cagra.1415s0007 1.0kb downstream 1.0kb downstream 2679 true Scaffold1415: 24220-26898 Capsella grandiflora
Cagra.1415s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1415: 24220-25219 Capsella grandiflora
Cagra.1415s0007 2.0kb upstream 2.0kb upstream 3679 true Scaffold1415: 25220-28898 Capsella grandiflora
Cagra.1415s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1415: 26899-28898 Capsella grandiflora
Cagra.1415s0007 2.0kb downstream 2.0kb downstream 3679 true Scaffold1415: 23220-26898 Capsella grandiflora
Cagra.1415s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1415: 23220-25219 Capsella grandiflora
Cagra.1415s0007 5.0kb upstream 5.0kb upstream 6679 true Scaffold1415: 25220-31898 Capsella grandiflora
Cagra.1415s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1415: 26899-31898 Capsella grandiflora
Cagra.1415s0007 5.0kb downstream 5.0kb downstream 6679 true Scaffold1415: 20220-26898 Capsella grandiflora
Cagra.1415s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1415: 20220-25219 Capsella grandiflora
Cagra.1415s0007 10.0kb upstream 10.0kb upstream 11679 true Scaffold1415: 25220-36898 Capsella grandiflora
Cagra.1415s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1415: 26899-36898 Capsella grandiflora
Cagra.1415s0007 10.0kb downstream 10.0kb downstream 11679 true Scaffold1415: 15220-26898 Capsella grandiflora
Cagra.1415s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1415: 15220-25219 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363832 5261 Brassicaceae View MSA
123798624 5264 Brassicales-Malvales View MSA
124296234 5266 SBM View MSA
124148445 5268 Malvidae View MSA
123874435 5270 Rosid View MSA
123458408 5271 Pentapetalae View MSA
122493813 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain