Gene : Cagra.1383s0054 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32091:SF5 - GLYCINE-RICH PROTEIN Genomic Order:  54
Name:  ? Cagra.1383s0054 Secondary Identifier:  ? PAC:28901783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0054 0.5kb upstream 0.5kb upstream 2481 true Scaffold1383: 183688-186168 Capsella grandiflora
Cagra.1383s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 185669-186168 Capsella grandiflora
Cagra.1383s0054 0.5kb downstream 0.5kb downstream 2481 true Scaffold1383: 183188-185668 Capsella grandiflora
Cagra.1383s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 183188-183687 Capsella grandiflora
Cagra.1383s0054 1.0kb upstream 1.0kb upstream 2981 true Scaffold1383: 183688-186668 Capsella grandiflora
Cagra.1383s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 185669-186668 Capsella grandiflora
Cagra.1383s0054 1.0kb downstream 1.0kb downstream 2981 true Scaffold1383: 182688-185668 Capsella grandiflora
Cagra.1383s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 182688-183687 Capsella grandiflora
Cagra.1383s0054 2.0kb upstream 2.0kb upstream 3981 true Scaffold1383: 183688-187668 Capsella grandiflora
Cagra.1383s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 185669-187668 Capsella grandiflora
Cagra.1383s0054 2.0kb downstream 2.0kb downstream 3981 true Scaffold1383: 181688-185668 Capsella grandiflora
Cagra.1383s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 181688-183687 Capsella grandiflora
Cagra.1383s0054 5.0kb upstream 5.0kb upstream 6981 true Scaffold1383: 183688-190668 Capsella grandiflora
Cagra.1383s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 185669-190668 Capsella grandiflora
Cagra.1383s0054 5.0kb downstream 5.0kb downstream 6981 true Scaffold1383: 178688-185668 Capsella grandiflora
Cagra.1383s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 178688-183687 Capsella grandiflora
Cagra.1383s0054 10.0kb upstream 10.0kb upstream 11981 true Scaffold1383: 183688-195668 Capsella grandiflora
Cagra.1383s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 185669-195668 Capsella grandiflora
Cagra.1383s0054 10.0kb downstream 10.0kb downstream 11981 true Scaffold1383: 173688-185668 Capsella grandiflora
Cagra.1383s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 173688-183687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360485 5261 Brassicaceae View MSA
123831124 5264 Brassicales-Malvales View MSA
124351625 5266 SBM View MSA
124253250 5268 Malvidae View MSA
124068960 5270 Rosid View MSA
123736646 5271 Pentapetalae View MSA
122769870 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain