Gene : Cagra.1390s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13018//PTHR13018:SF32 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED Genomic Order:  6
Name:  ? Cagra.1390s0006 Secondary Identifier:  ? PAC:28907307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1390s0006 0.5kb upstream 0.5kb upstream 4757 true Scaffold1390: 17638-22394 Capsella grandiflora
Cagra.1390s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1390: 21895-22394 Capsella grandiflora
Cagra.1390s0006 0.5kb downstream 0.5kb downstream 4757 true Scaffold1390: 17138-21894 Capsella grandiflora
Cagra.1390s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1390: 17138-17637 Capsella grandiflora
Cagra.1390s0006 1.0kb upstream 1.0kb upstream 5257 true Scaffold1390: 17638-22894 Capsella grandiflora
Cagra.1390s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1390: 21895-22894 Capsella grandiflora
Cagra.1390s0006 1.0kb downstream 1.0kb downstream 5257 true Scaffold1390: 16638-21894 Capsella grandiflora
Cagra.1390s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1390: 16638-17637 Capsella grandiflora
Cagra.1390s0006 2.0kb upstream 2.0kb upstream 6257 true Scaffold1390: 17638-23894 Capsella grandiflora
Cagra.1390s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1390: 21895-23894 Capsella grandiflora
Cagra.1390s0006 2.0kb downstream 2.0kb downstream 6257 true Scaffold1390: 15638-21894 Capsella grandiflora
Cagra.1390s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1390: 15638-17637 Capsella grandiflora
Cagra.1390s0006 5.0kb upstream 5.0kb upstream 9257 true Scaffold1390: 17638-26894 Capsella grandiflora
Cagra.1390s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1390: 21895-26894 Capsella grandiflora
Cagra.1390s0006 5.0kb downstream 5.0kb downstream 9257 true Scaffold1390: 12638-21894 Capsella grandiflora
Cagra.1390s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1390: 12638-17637 Capsella grandiflora
Cagra.1390s0006 10.0kb upstream 10.0kb upstream 14257 true Scaffold1390: 17638-31894 Capsella grandiflora
Cagra.1390s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1390: 21895-31894 Capsella grandiflora
Cagra.1390s0006 10.0kb downstream 10.0kb downstream 14257 true Scaffold1390: 7638-21894 Capsella grandiflora
Cagra.1390s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1390: 7638-17637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367769 5261 Brassicaceae View MSA
123840825 5264 Brassicales-Malvales View MSA
124342911 5266 SBM View MSA
124249614 5268 Malvidae View MSA
124063440 5270 Rosid View MSA
123744982 5271 Pentapetalae View MSA
122786310 5272 Eudicot View MSA
122047251 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121349616 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain