Gene : Cagra.1378s0007 C. grandiflora v1.1
Defline:  (1 of 1) 1.11.1.7//3.1.3.2 - Peroxidase / Lactoperoxidase // Acid phosphatase / Phosphomonoesterase Genomic Order:  7
Name:  ? Cagra.1378s0007 Secondary Identifier:  ? PAC:28903308
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-6348 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1378s0007 0.5kb upstream 0.5kb upstream 2160 true Scaffold1378: 25721-27880 Capsella grandiflora
Cagra.1378s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1378: 27381-27880 Capsella grandiflora
Cagra.1378s0007 0.5kb downstream 0.5kb downstream 2160 true Scaffold1378: 25221-27380 Capsella grandiflora
Cagra.1378s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1378: 25221-25720 Capsella grandiflora
Cagra.1378s0007 1.0kb upstream 1.0kb upstream 2660 true Scaffold1378: 25721-28380 Capsella grandiflora
Cagra.1378s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1378: 27381-28380 Capsella grandiflora
Cagra.1378s0007 1.0kb downstream 1.0kb downstream 2660 true Scaffold1378: 24721-27380 Capsella grandiflora
Cagra.1378s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1378: 24721-25720 Capsella grandiflora
Cagra.1378s0007 2.0kb upstream 2.0kb upstream 3660 true Scaffold1378: 25721-29380 Capsella grandiflora
Cagra.1378s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1378: 27381-29380 Capsella grandiflora
Cagra.1378s0007 2.0kb downstream 2.0kb downstream 3660 true Scaffold1378: 23721-27380 Capsella grandiflora
Cagra.1378s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1378: 23721-25720 Capsella grandiflora
Cagra.1378s0007 5.0kb upstream 5.0kb upstream 6660 true Scaffold1378: 25721-32380 Capsella grandiflora
Cagra.1378s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1378: 27381-32380 Capsella grandiflora
Cagra.1378s0007 5.0kb downstream 5.0kb downstream 6660 true Scaffold1378: 20721-27380 Capsella grandiflora
Cagra.1378s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1378: 20721-25720 Capsella grandiflora
Cagra.1378s0007 10.0kb upstream 10.0kb upstream 11660 true Scaffold1378: 25721-37380 Capsella grandiflora
Cagra.1378s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1378: 27381-37380 Capsella grandiflora
Cagra.1378s0007 10.0kb downstream 10.0kb downstream 11660 true Scaffold1378: 15721-27380 Capsella grandiflora
Cagra.1378s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1378: 15721-25720 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374706 5261 Brassicaceae View MSA
123832279 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain