Gene : Cagra.1383s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13068:SF5 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.1383s0005 Secondary Identifier:  ? PAC:28901753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0005 0.5kb upstream 0.5kb upstream 1801 true Scaffold1383: 14582-16382 Capsella grandiflora
Cagra.1383s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 14582-15081 Capsella grandiflora
Cagra.1383s0005 0.5kb downstream 0.5kb downstream 1801 true Scaffold1383: 15082-16882 Capsella grandiflora
Cagra.1383s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 16383-16882 Capsella grandiflora
Cagra.1383s0005 1.0kb upstream 1.0kb upstream 2301 true Scaffold1383: 14082-16382 Capsella grandiflora
Cagra.1383s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 14082-15081 Capsella grandiflora
Cagra.1383s0005 1.0kb downstream 1.0kb downstream 2301 true Scaffold1383: 15082-17382 Capsella grandiflora
Cagra.1383s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 16383-17382 Capsella grandiflora
Cagra.1383s0005 2.0kb upstream 2.0kb upstream 3301 true Scaffold1383: 13082-16382 Capsella grandiflora
Cagra.1383s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 13082-15081 Capsella grandiflora
Cagra.1383s0005 2.0kb downstream 2.0kb downstream 3301 true Scaffold1383: 15082-18382 Capsella grandiflora
Cagra.1383s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 16383-18382 Capsella grandiflora
Cagra.1383s0005 5.0kb upstream 5.0kb upstream 6301 true Scaffold1383: 10082-16382 Capsella grandiflora
Cagra.1383s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 10082-15081 Capsella grandiflora
Cagra.1383s0005 5.0kb downstream 5.0kb downstream 6301 true Scaffold1383: 15082-21382 Capsella grandiflora
Cagra.1383s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 16383-21382 Capsella grandiflora
Cagra.1383s0005 10.0kb upstream 10.0kb upstream 11301 true Scaffold1383: 5082-16382 Capsella grandiflora
Cagra.1383s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 5082-15081 Capsella grandiflora
Cagra.1383s0005 10.0kb downstream 10.0kb downstream 11301 true Scaffold1383: 15082-26382 Capsella grandiflora
Cagra.1383s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 16383-26382 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041051 5273 Angiosperm View MSA
122362686 5261 Brassicaceae View MSA
123828016 5264 Brassicales-Malvales View MSA
124337555 5266 SBM View MSA
124244971 5268 Malvidae View MSA
124063564 5270 Rosid View MSA
123745270 5271 Pentapetalae View MSA
122786345 5272 Eudicot View MSA
121348638 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain