Gene : Cagra.1365s0052 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12581 - HIV-1 REV BINDING PROTEIN 2, 3 Genomic Order:  52
Name:  ? Cagra.1365s0052 Secondary Identifier:  ? PAC:28919278
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0052 0.5kb upstream 0.5kb upstream 3222 true Scaffold1365: 166274-169495 Capsella grandiflora
Cagra.1365s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 166274-166773 Capsella grandiflora
Cagra.1365s0052 0.5kb downstream 0.5kb downstream 3222 true Scaffold1365: 166774-169995 Capsella grandiflora
Cagra.1365s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 169496-169995 Capsella grandiflora
Cagra.1365s0052 1.0kb upstream 1.0kb upstream 3722 true Scaffold1365: 165774-169495 Capsella grandiflora
Cagra.1365s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 165774-166773 Capsella grandiflora
Cagra.1365s0052 1.0kb downstream 1.0kb downstream 3722 true Scaffold1365: 166774-170495 Capsella grandiflora
Cagra.1365s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 169496-170495 Capsella grandiflora
Cagra.1365s0052 2.0kb upstream 2.0kb upstream 4722 true Scaffold1365: 164774-169495 Capsella grandiflora
Cagra.1365s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 164774-166773 Capsella grandiflora
Cagra.1365s0052 2.0kb downstream 2.0kb downstream 4722 true Scaffold1365: 166774-171495 Capsella grandiflora
Cagra.1365s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 169496-171495 Capsella grandiflora
Cagra.1365s0052 5.0kb upstream 5.0kb upstream 7722 true Scaffold1365: 161774-169495 Capsella grandiflora
Cagra.1365s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 161774-166773 Capsella grandiflora
Cagra.1365s0052 5.0kb downstream 5.0kb downstream 7722 true Scaffold1365: 166774-174495 Capsella grandiflora
Cagra.1365s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 169496-174495 Capsella grandiflora
Cagra.1365s0052 10.0kb upstream 10.0kb upstream 12722 true Scaffold1365: 156774-169495 Capsella grandiflora
Cagra.1365s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 156774-166773 Capsella grandiflora
Cagra.1365s0052 10.0kb downstream 10.0kb downstream 12722 true Scaffold1365: 166774-179495 Capsella grandiflora
Cagra.1365s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 169496-179495 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372082 5261 Brassicaceae View MSA
123827828 5264 Brassicales-Malvales View MSA
124336540 5266 SBM View MSA
124241113 5268 Malvidae View MSA
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain