Gene : Cagra.1365s0066 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  66
Name:  ? Cagra.1365s0066 Secondary Identifier:  ? PAC:28919179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0066 0.5kb upstream 0.5kb upstream 3288 true Scaffold1365: 215995-219282 Capsella grandiflora
Cagra.1365s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 218783-219282 Capsella grandiflora
Cagra.1365s0066 0.5kb downstream 0.5kb downstream 3288 true Scaffold1365: 215495-218782 Capsella grandiflora
Cagra.1365s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 215495-215994 Capsella grandiflora
Cagra.1365s0066 1.0kb upstream 1.0kb upstream 3788 true Scaffold1365: 215995-219782 Capsella grandiflora
Cagra.1365s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 218783-219782 Capsella grandiflora
Cagra.1365s0066 1.0kb downstream 1.0kb downstream 3788 true Scaffold1365: 214995-218782 Capsella grandiflora
Cagra.1365s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 214995-215994 Capsella grandiflora
Cagra.1365s0066 2.0kb upstream 2.0kb upstream 4788 true Scaffold1365: 215995-220782 Capsella grandiflora
Cagra.1365s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 218783-220782 Capsella grandiflora
Cagra.1365s0066 2.0kb downstream 2.0kb downstream 4788 true Scaffold1365: 213995-218782 Capsella grandiflora
Cagra.1365s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 213995-215994 Capsella grandiflora
Cagra.1365s0066 5.0kb upstream 5.0kb upstream 7788 true Scaffold1365: 215995-223782 Capsella grandiflora
Cagra.1365s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 218783-223782 Capsella grandiflora
Cagra.1365s0066 5.0kb downstream 5.0kb downstream 7788 true Scaffold1365: 210995-218782 Capsella grandiflora
Cagra.1365s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 210995-215994 Capsella grandiflora
Cagra.1365s0066 10.0kb upstream 10.0kb upstream 12788 true Scaffold1365: 215995-228782 Capsella grandiflora
Cagra.1365s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 218783-228782 Capsella grandiflora
Cagra.1365s0066 10.0kb downstream 10.0kb downstream 12788 true Scaffold1365: 205995-218782 Capsella grandiflora
Cagra.1365s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 205995-215994 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370176 5261 Brassicaceae View MSA
123840056 5264 Brassicales-Malvales View MSA
124345924 5266 SBM View MSA
124245164 5268 Malvidae View MSA
124061901 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain