Gene : Cagra.1365s0033 C. grandiflora v1.1
Defline:  (1 of 1) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase Genomic Order:  33
Name:  ? Cagra.1365s0033 Secondary Identifier:  ? PAC:28919244
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5188 Capsella grandiflora pathologic  
Cgrandiflora PWY-5189 Capsella grandiflora pathologic  
Cgrandiflora PWY-5918 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0033 0.5kb upstream 0.5kb upstream 2752 true Scaffold1365: 114418-117169 Capsella grandiflora
Cagra.1365s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 116670-117169 Capsella grandiflora
Cagra.1365s0033 0.5kb downstream 0.5kb downstream 2752 true Scaffold1365: 113918-116669 Capsella grandiflora
Cagra.1365s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 113918-114417 Capsella grandiflora
Cagra.1365s0033 1.0kb upstream 1.0kb upstream 3252 true Scaffold1365: 114418-117669 Capsella grandiflora
Cagra.1365s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 116670-117669 Capsella grandiflora
Cagra.1365s0033 1.0kb downstream 1.0kb downstream 3252 true Scaffold1365: 113418-116669 Capsella grandiflora
Cagra.1365s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 113418-114417 Capsella grandiflora
Cagra.1365s0033 2.0kb upstream 2.0kb upstream 4252 true Scaffold1365: 114418-118669 Capsella grandiflora
Cagra.1365s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 116670-118669 Capsella grandiflora
Cagra.1365s0033 2.0kb downstream 2.0kb downstream 4252 true Scaffold1365: 112418-116669 Capsella grandiflora
Cagra.1365s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 112418-114417 Capsella grandiflora
Cagra.1365s0033 5.0kb upstream 5.0kb upstream 7252 true Scaffold1365: 114418-121669 Capsella grandiflora
Cagra.1365s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 116670-121669 Capsella grandiflora
Cagra.1365s0033 5.0kb downstream 5.0kb downstream 7252 true Scaffold1365: 109418-116669 Capsella grandiflora
Cagra.1365s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 109418-114417 Capsella grandiflora
Cagra.1365s0033 10.0kb upstream 10.0kb upstream 12252 true Scaffold1365: 114418-126669 Capsella grandiflora
Cagra.1365s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 116670-126669 Capsella grandiflora
Cagra.1365s0033 10.0kb downstream 10.0kb downstream 12252 true Scaffold1365: 104418-116669 Capsella grandiflora
Cagra.1365s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 104418-114417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364293 5261 Brassicaceae View MSA
123830880 5264 Brassicales-Malvales View MSA
124350121 5266 SBM View MSA
124253286 5268 Malvidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain