Gene : Cagra.1365s0037 C. grandiflora v1.1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  37
Name:  ? Cagra.1365s0037 Secondary Identifier:  ? PAC:28919257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0037 0.5kb upstream 0.5kb upstream 3799 true Scaffold1365: 123353-127151 Capsella grandiflora
Cagra.1365s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 126652-127151 Capsella grandiflora
Cagra.1365s0037 0.5kb downstream 0.5kb downstream 3799 true Scaffold1365: 122853-126651 Capsella grandiflora
Cagra.1365s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 122853-123352 Capsella grandiflora
Cagra.1365s0037 1.0kb upstream 1.0kb upstream 4299 true Scaffold1365: 123353-127651 Capsella grandiflora
Cagra.1365s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 126652-127651 Capsella grandiflora
Cagra.1365s0037 1.0kb downstream 1.0kb downstream 4299 true Scaffold1365: 122353-126651 Capsella grandiflora
Cagra.1365s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 122353-123352 Capsella grandiflora
Cagra.1365s0037 2.0kb upstream 2.0kb upstream 5299 true Scaffold1365: 123353-128651 Capsella grandiflora
Cagra.1365s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 126652-128651 Capsella grandiflora
Cagra.1365s0037 2.0kb downstream 2.0kb downstream 5299 true Scaffold1365: 121353-126651 Capsella grandiflora
Cagra.1365s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 121353-123352 Capsella grandiflora
Cagra.1365s0037 5.0kb upstream 5.0kb upstream 8299 true Scaffold1365: 123353-131651 Capsella grandiflora
Cagra.1365s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 126652-131651 Capsella grandiflora
Cagra.1365s0037 5.0kb downstream 5.0kb downstream 8299 true Scaffold1365: 118353-126651 Capsella grandiflora
Cagra.1365s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 118353-123352 Capsella grandiflora
Cagra.1365s0037 10.0kb upstream 10.0kb upstream 13299 true Scaffold1365: 123353-136651 Capsella grandiflora
Cagra.1365s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 126652-136651 Capsella grandiflora
Cagra.1365s0037 10.0kb downstream 10.0kb downstream 13299 true Scaffold1365: 113353-126651 Capsella grandiflora
Cagra.1365s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 113353-123352 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363175 5261 Brassicaceae View MSA
123833252 5264 Brassicales-Malvales View MSA
124339215 5266 SBM View MSA
124241904 5268 Malvidae View MSA
124063102 5270 Rosid View MSA
123740388 5271 Pentapetalae View MSA
122790856 5272 Eudicot View MSA
122046765 5273 Angiosperm View MSA
121310656 5274 Embryophyte View MSA
123348085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain