Gene : Cagra.1365s0048 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19845:SF0 - KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1 Genomic Order:  48
Name:  ? Cagra.1365s0048 Secondary Identifier:  ? PAC:28919239
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0048 0.5kb upstream 0.5kb upstream 6807 true Scaffold1365: 152824-159630 Capsella grandiflora
Cagra.1365s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 152824-153323 Capsella grandiflora
Cagra.1365s0048 0.5kb downstream 0.5kb downstream 6807 true Scaffold1365: 153324-160130 Capsella grandiflora
Cagra.1365s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 159631-160130 Capsella grandiflora
Cagra.1365s0048 1.0kb upstream 1.0kb upstream 7307 true Scaffold1365: 152324-159630 Capsella grandiflora
Cagra.1365s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 152324-153323 Capsella grandiflora
Cagra.1365s0048 1.0kb downstream 1.0kb downstream 7307 true Scaffold1365: 153324-160630 Capsella grandiflora
Cagra.1365s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 159631-160630 Capsella grandiflora
Cagra.1365s0048 2.0kb upstream 2.0kb upstream 8307 true Scaffold1365: 151324-159630 Capsella grandiflora
Cagra.1365s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 151324-153323 Capsella grandiflora
Cagra.1365s0048 2.0kb downstream 2.0kb downstream 8307 true Scaffold1365: 153324-161630 Capsella grandiflora
Cagra.1365s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 159631-161630 Capsella grandiflora
Cagra.1365s0048 5.0kb upstream 5.0kb upstream 11307 true Scaffold1365: 148324-159630 Capsella grandiflora
Cagra.1365s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 148324-153323 Capsella grandiflora
Cagra.1365s0048 5.0kb downstream 5.0kb downstream 11307 true Scaffold1365: 153324-164630 Capsella grandiflora
Cagra.1365s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 159631-164630 Capsella grandiflora
Cagra.1365s0048 10.0kb upstream 10.0kb upstream 16307 true Scaffold1365: 143324-159630 Capsella grandiflora
Cagra.1365s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 143324-153323 Capsella grandiflora
Cagra.1365s0048 10.0kb downstream 10.0kb downstream 16307 true Scaffold1365: 153324-169630 Capsella grandiflora
Cagra.1365s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 159631-169630 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363042 5261 Brassicaceae View MSA
123837633 5264 Brassicales-Malvales View MSA
124350797 5266 SBM View MSA
124240803 5268 Malvidae View MSA
124070795 5270 Rosid View MSA
123750232 5271 Pentapetalae View MSA
122791817 5272 Eudicot View MSA
122044503 5273 Angiosperm View MSA
121345721 5274 Embryophyte View MSA
123425332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain