Gene : Cagra.1642s0080 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Genomic Order:  80
Name:  ? Cagra.1642s0080 Secondary Identifier:  ? PAC:28898827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0080 0.5kb upstream 0.5kb upstream 3186 true Scaffold1642: 278060-281245 Capsella grandiflora
Cagra.1642s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 280746-281245 Capsella grandiflora
Cagra.1642s0080 0.5kb downstream 0.5kb downstream 3186 true Scaffold1642: 277560-280745 Capsella grandiflora
Cagra.1642s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 277560-278059 Capsella grandiflora
Cagra.1642s0080 1.0kb upstream 1.0kb upstream 3686 true Scaffold1642: 278060-281745 Capsella grandiflora
Cagra.1642s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 280746-281745 Capsella grandiflora
Cagra.1642s0080 1.0kb downstream 1.0kb downstream 3686 true Scaffold1642: 277060-280745 Capsella grandiflora
Cagra.1642s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 277060-278059 Capsella grandiflora
Cagra.1642s0080 2.0kb upstream 2.0kb upstream 4686 true Scaffold1642: 278060-282745 Capsella grandiflora
Cagra.1642s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 280746-282745 Capsella grandiflora
Cagra.1642s0080 2.0kb downstream 2.0kb downstream 4686 true Scaffold1642: 276060-280745 Capsella grandiflora
Cagra.1642s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 276060-278059 Capsella grandiflora
Cagra.1642s0080 5.0kb upstream 5.0kb upstream 7686 true Scaffold1642: 278060-285745 Capsella grandiflora
Cagra.1642s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 280746-285745 Capsella grandiflora
Cagra.1642s0080 5.0kb downstream 5.0kb downstream 7686 true Scaffold1642: 273060-280745 Capsella grandiflora
Cagra.1642s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 273060-278059 Capsella grandiflora
Cagra.1642s0080 10.0kb upstream 10.0kb upstream 12686 true Scaffold1642: 278060-290745 Capsella grandiflora
Cagra.1642s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 280746-290745 Capsella grandiflora
Cagra.1642s0080 10.0kb downstream 10.0kb downstream 12686 true Scaffold1642: 268060-280745 Capsella grandiflora
Cagra.1642s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 268060-278059 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511270 5273 Angiosperm View MSA
122374538 5261 Brassicaceae View MSA
123800773 5264 Brassicales-Malvales View MSA
124298145 5266 SBM View MSA
124149863 5268 Malvidae View MSA
123875589 5270 Rosid View MSA
123459385 5271 Pentapetalae View MSA
122494776 5272 Eudicot View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain