Gene : Cagra.1642s0085 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23086:SF37 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4-RELATED Genomic Order:  85
Name:  ? Cagra.1642s0085 Secondary Identifier:  ? PAC:28898877
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0085 0.5kb upstream 0.5kb upstream 4278 true Scaffold1642: 296996-301273 Capsella grandiflora
Cagra.1642s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 296996-297495 Capsella grandiflora
Cagra.1642s0085 0.5kb downstream 0.5kb downstream 4278 true Scaffold1642: 297496-301773 Capsella grandiflora
Cagra.1642s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 301274-301773 Capsella grandiflora
Cagra.1642s0085 1.0kb upstream 1.0kb upstream 4778 true Scaffold1642: 296496-301273 Capsella grandiflora
Cagra.1642s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 296496-297495 Capsella grandiflora
Cagra.1642s0085 1.0kb downstream 1.0kb downstream 4778 true Scaffold1642: 297496-302273 Capsella grandiflora
Cagra.1642s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 301274-302273 Capsella grandiflora
Cagra.1642s0085 2.0kb upstream 2.0kb upstream 5778 true Scaffold1642: 295496-301273 Capsella grandiflora
Cagra.1642s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 295496-297495 Capsella grandiflora
Cagra.1642s0085 2.0kb downstream 2.0kb downstream 5778 true Scaffold1642: 297496-303273 Capsella grandiflora
Cagra.1642s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 301274-303273 Capsella grandiflora
Cagra.1642s0085 5.0kb upstream 5.0kb upstream 8778 true Scaffold1642: 292496-301273 Capsella grandiflora
Cagra.1642s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 292496-297495 Capsella grandiflora
Cagra.1642s0085 5.0kb downstream 5.0kb downstream 8778 true Scaffold1642: 297496-306273 Capsella grandiflora
Cagra.1642s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 301274-306273 Capsella grandiflora
Cagra.1642s0085 10.0kb upstream 10.0kb upstream 13778 true Scaffold1642: 287496-301273 Capsella grandiflora
Cagra.1642s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 287496-297495 Capsella grandiflora
Cagra.1642s0085 10.0kb downstream 10.0kb downstream 13778 true Scaffold1642: 297496-311273 Capsella grandiflora
Cagra.1642s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 301274-311273 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371417 5261 Brassicaceae View MSA
123839827 5264 Brassicales-Malvales View MSA
124340545 5266 SBM View MSA
124242521 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain