Gene : Cagra.1642s0094 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Genomic Order:  94
Name:  ? Cagra.1642s0094 Secondary Identifier:  ? PAC:28898872
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1642s0094 0.5kb upstream 0.5kb upstream 1914 true Scaffold1642: 355261-357174 Capsella grandiflora
Cagra.1642s0094 0.5kb upstream 0.5kb upstream 500 false Scaffold1642: 355261-355760 Capsella grandiflora
Cagra.1642s0094 0.5kb downstream 0.5kb downstream 1914 true Scaffold1642: 355761-357674 Capsella grandiflora
Cagra.1642s0094 0.5kb downstream 0.5kb downstream 500 false Scaffold1642: 357175-357674 Capsella grandiflora
Cagra.1642s0094 1.0kb upstream 1.0kb upstream 2414 true Scaffold1642: 354761-357174 Capsella grandiflora
Cagra.1642s0094 1.0kb upstream 1.0kb upstream 1000 false Scaffold1642: 354761-355760 Capsella grandiflora
Cagra.1642s0094 1.0kb downstream 1.0kb downstream 2414 true Scaffold1642: 355761-358174 Capsella grandiflora
Cagra.1642s0094 1.0kb downstream 1.0kb downstream 1000 false Scaffold1642: 357175-358174 Capsella grandiflora
Cagra.1642s0094 2.0kb upstream 2.0kb upstream 3414 true Scaffold1642: 353761-357174 Capsella grandiflora
Cagra.1642s0094 2.0kb upstream 2.0kb upstream 2000 false Scaffold1642: 353761-355760 Capsella grandiflora
Cagra.1642s0094 2.0kb downstream 2.0kb downstream 3414 true Scaffold1642: 355761-359174 Capsella grandiflora
Cagra.1642s0094 2.0kb downstream 2.0kb downstream 2000 false Scaffold1642: 357175-359174 Capsella grandiflora
Cagra.1642s0094 5.0kb upstream 5.0kb upstream 6414 true Scaffold1642: 350761-357174 Capsella grandiflora
Cagra.1642s0094 5.0kb upstream 5.0kb upstream 5000 false Scaffold1642: 350761-355760 Capsella grandiflora
Cagra.1642s0094 5.0kb downstream 5.0kb downstream 6414 true Scaffold1642: 355761-362174 Capsella grandiflora
Cagra.1642s0094 5.0kb downstream 5.0kb downstream 5000 false Scaffold1642: 357175-362174 Capsella grandiflora
Cagra.1642s0094 10.0kb upstream 10.0kb upstream 11414 true Scaffold1642: 345761-357174 Capsella grandiflora
Cagra.1642s0094 10.0kb upstream 10.0kb upstream 10000 false Scaffold1642: 345761-355760 Capsella grandiflora
Cagra.1642s0094 10.0kb downstream 10.0kb downstream 11414 true Scaffold1642: 355761-367174 Capsella grandiflora
Cagra.1642s0094 10.0kb downstream 10.0kb downstream 10000 false Scaffold1642: 357175-367174 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374866 5261 Brassicaceae View MSA
123800841 5264 Brassicales-Malvales View MSA
124349790 5266 SBM View MSA
124240672 5268 Malvidae View MSA
124067082 5270 Rosid View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain