Gene : Cagra.1655s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12050 - LEPTIN RECEPTOR-RELATED Genomic Order:  17
Name:  ? Cagra.1655s0017 Secondary Identifier:  ? PAC:28902908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0017 0.5kb upstream 0.5kb upstream 2413 true Scaffold1655: 67768-70180 Capsella grandiflora
Cagra.1655s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 67768-68267 Capsella grandiflora
Cagra.1655s0017 0.5kb downstream 0.5kb downstream 2413 true Scaffold1655: 68268-70680 Capsella grandiflora
Cagra.1655s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 70181-70680 Capsella grandiflora
Cagra.1655s0017 1.0kb upstream 1.0kb upstream 2913 true Scaffold1655: 67268-70180 Capsella grandiflora
Cagra.1655s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 67268-68267 Capsella grandiflora
Cagra.1655s0017 1.0kb downstream 1.0kb downstream 2913 true Scaffold1655: 68268-71180 Capsella grandiflora
Cagra.1655s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 70181-71180 Capsella grandiflora
Cagra.1655s0017 2.0kb upstream 2.0kb upstream 3913 true Scaffold1655: 66268-70180 Capsella grandiflora
Cagra.1655s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 66268-68267 Capsella grandiflora
Cagra.1655s0017 2.0kb downstream 2.0kb downstream 3913 true Scaffold1655: 68268-72180 Capsella grandiflora
Cagra.1655s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 70181-72180 Capsella grandiflora
Cagra.1655s0017 5.0kb upstream 5.0kb upstream 6913 true Scaffold1655: 63268-70180 Capsella grandiflora
Cagra.1655s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 63268-68267 Capsella grandiflora
Cagra.1655s0017 5.0kb downstream 5.0kb downstream 6913 true Scaffold1655: 68268-75180 Capsella grandiflora
Cagra.1655s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 70181-75180 Capsella grandiflora
Cagra.1655s0017 10.0kb upstream 10.0kb upstream 11913 true Scaffold1655: 58268-70180 Capsella grandiflora
Cagra.1655s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 58268-68267 Capsella grandiflora
Cagra.1655s0017 10.0kb downstream 10.0kb downstream 11913 true Scaffold1655: 68268-80180 Capsella grandiflora
Cagra.1655s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 70181-80180 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332787 5261 Brassicaceae Singleton cluster - no MSA
123839525 5264 Brassicales-Malvales View MSA
124350457 5266 SBM View MSA
124238442 5268 Malvidae View MSA
124065379 5270 Rosid View MSA
123747722 5271 Pentapetalae View MSA
122794260 5272 Eudicot View MSA
122045562 5273 Angiosperm View MSA
121348404 5274 Embryophyte View MSA
123428267 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain