Gene : Cagra.1655s0021 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23177:SF24 - RHO GTPASE-ACTIVATING PROTEIN 3-RELATED Genomic Order:  21
Name:  ? Cagra.1655s0021 Secondary Identifier:  ? PAC:28902879
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0021 0.5kb upstream 0.5kb upstream 3223 true Scaffold1655: 78584-81806 Capsella grandiflora
Cagra.1655s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 78584-79083 Capsella grandiflora
Cagra.1655s0021 0.5kb downstream 0.5kb downstream 3223 true Scaffold1655: 79084-82306 Capsella grandiflora
Cagra.1655s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 81807-82306 Capsella grandiflora
Cagra.1655s0021 1.0kb upstream 1.0kb upstream 3723 true Scaffold1655: 78084-81806 Capsella grandiflora
Cagra.1655s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 78084-79083 Capsella grandiflora
Cagra.1655s0021 1.0kb downstream 1.0kb downstream 3723 true Scaffold1655: 79084-82806 Capsella grandiflora
Cagra.1655s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 81807-82806 Capsella grandiflora
Cagra.1655s0021 2.0kb upstream 2.0kb upstream 4723 true Scaffold1655: 77084-81806 Capsella grandiflora
Cagra.1655s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 77084-79083 Capsella grandiflora
Cagra.1655s0021 2.0kb downstream 2.0kb downstream 4723 true Scaffold1655: 79084-83806 Capsella grandiflora
Cagra.1655s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 81807-83806 Capsella grandiflora
Cagra.1655s0021 5.0kb upstream 5.0kb upstream 7723 true Scaffold1655: 74084-81806 Capsella grandiflora
Cagra.1655s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 74084-79083 Capsella grandiflora
Cagra.1655s0021 5.0kb downstream 5.0kb downstream 7723 true Scaffold1655: 79084-86806 Capsella grandiflora
Cagra.1655s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 81807-86806 Capsella grandiflora
Cagra.1655s0021 10.0kb upstream 10.0kb upstream 12723 true Scaffold1655: 69084-81806 Capsella grandiflora
Cagra.1655s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 69084-79083 Capsella grandiflora
Cagra.1655s0021 10.0kb downstream 10.0kb downstream 12723 true Scaffold1655: 79084-91806 Capsella grandiflora
Cagra.1655s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 81807-91806 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360495 5261 Brassicaceae View MSA
123830318 5264 Brassicales-Malvales View MSA
124321662 5266 SBM View MSA
124251064 5268 Malvidae View MSA
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain