Gene : Cagra.1655s0049 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12896 - PAX6 NEIGHBOR PROTEIN PAXNEB Genomic Order:  49
Name:  ? Cagra.1655s0049 Secondary Identifier:  ? PAC:28902870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1655s0049 0.5kb upstream 0.5kb upstream 3539 true Scaffold1655: 181796-185334 Capsella grandiflora
Cagra.1655s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold1655: 181796-182295 Capsella grandiflora
Cagra.1655s0049 0.5kb downstream 0.5kb downstream 3539 true Scaffold1655: 182296-185834 Capsella grandiflora
Cagra.1655s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold1655: 185335-185834 Capsella grandiflora
Cagra.1655s0049 1.0kb upstream 1.0kb upstream 4039 true Scaffold1655: 181296-185334 Capsella grandiflora
Cagra.1655s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold1655: 181296-182295 Capsella grandiflora
Cagra.1655s0049 1.0kb downstream 1.0kb downstream 4039 true Scaffold1655: 182296-186334 Capsella grandiflora
Cagra.1655s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold1655: 185335-186334 Capsella grandiflora
Cagra.1655s0049 2.0kb upstream 2.0kb upstream 5039 true Scaffold1655: 180296-185334 Capsella grandiflora
Cagra.1655s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold1655: 180296-182295 Capsella grandiflora
Cagra.1655s0049 2.0kb downstream 2.0kb downstream 5039 true Scaffold1655: 182296-187334 Capsella grandiflora
Cagra.1655s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold1655: 185335-187334 Capsella grandiflora
Cagra.1655s0049 5.0kb upstream 5.0kb upstream 8039 true Scaffold1655: 177296-185334 Capsella grandiflora
Cagra.1655s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold1655: 177296-182295 Capsella grandiflora
Cagra.1655s0049 5.0kb downstream 5.0kb downstream 8039 true Scaffold1655: 182296-190334 Capsella grandiflora
Cagra.1655s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold1655: 185335-190334 Capsella grandiflora
Cagra.1655s0049 10.0kb upstream 10.0kb upstream 13039 true Scaffold1655: 172296-185334 Capsella grandiflora
Cagra.1655s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold1655: 172296-182295 Capsella grandiflora
Cagra.1655s0049 10.0kb downstream 10.0kb downstream 13039 true Scaffold1655: 182296-195334 Capsella grandiflora
Cagra.1655s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold1655: 185335-195334 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369214 5261 Brassicaceae View MSA
123827864 5264 Brassicales-Malvales View MSA
124340922 5266 SBM View MSA
124242536 5268 Malvidae View MSA
124061427 5270 Rosid View MSA
123751763 5271 Pentapetalae View MSA
122786898 5272 Eudicot View MSA
122045892 5273 Angiosperm View MSA
121347057 5274 Embryophyte View MSA
123425330 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain