Gene : Cagra.1637s0014 C. grandiflora v1.1
Defline:  (1 of 2) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Genomic Order:  14
Name:  ? Cagra.1637s0014 Secondary Identifier:  ? PAC:28897802
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1637s0014 0.5kb upstream 0.5kb upstream 2119 true Scaffold1637: 59384-61502 Capsella grandiflora
Cagra.1637s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1637: 61003-61502 Capsella grandiflora
Cagra.1637s0014 0.5kb downstream 0.5kb downstream 2119 true Scaffold1637: 58884-61002 Capsella grandiflora
Cagra.1637s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1637: 58884-59383 Capsella grandiflora
Cagra.1637s0014 1.0kb upstream 1.0kb upstream 2619 true Scaffold1637: 59384-62002 Capsella grandiflora
Cagra.1637s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1637: 61003-62002 Capsella grandiflora
Cagra.1637s0014 1.0kb downstream 1.0kb downstream 2619 true Scaffold1637: 58384-61002 Capsella grandiflora
Cagra.1637s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1637: 58384-59383 Capsella grandiflora
Cagra.1637s0014 2.0kb upstream 2.0kb upstream 3619 true Scaffold1637: 59384-63002 Capsella grandiflora
Cagra.1637s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1637: 61003-63002 Capsella grandiflora
Cagra.1637s0014 2.0kb downstream 2.0kb downstream 3619 true Scaffold1637: 57384-61002 Capsella grandiflora
Cagra.1637s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1637: 57384-59383 Capsella grandiflora
Cagra.1637s0014 5.0kb upstream 5.0kb upstream 6619 true Scaffold1637: 59384-66002 Capsella grandiflora
Cagra.1637s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1637: 61003-66002 Capsella grandiflora
Cagra.1637s0014 5.0kb downstream 5.0kb downstream 6619 true Scaffold1637: 54384-61002 Capsella grandiflora
Cagra.1637s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1637: 54384-59383 Capsella grandiflora
Cagra.1637s0014 10.0kb upstream 10.0kb upstream 11619 true Scaffold1637: 59384-71002 Capsella grandiflora
Cagra.1637s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1637: 61003-71002 Capsella grandiflora
Cagra.1637s0014 10.0kb downstream 10.0kb downstream 11619 true Scaffold1637: 49384-61002 Capsella grandiflora
Cagra.1637s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1637: 49384-59383 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510399 5273 Angiosperm View MSA
122363369 5261 Brassicaceae View MSA
123798526 5264 Brassicales-Malvales View MSA
124296152 5266 SBM View MSA
124148386 5268 Malvidae View MSA
123874385 5270 Rosid View MSA
123458369 5271 Pentapetalae View MSA
122493775 5272 Eudicot View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain