Gene : Cagra.1629s0030 C. grandiflora v1.1
Defline:  (1 of 6) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  30
Name:  ? Cagra.1629s0030 Secondary Identifier:  ? PAC:28912614
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1629s0030 0.5kb upstream 0.5kb upstream 2183 true Scaffold1629: 164312-166494 Capsella grandiflora
Cagra.1629s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1629: 164312-164811 Capsella grandiflora
Cagra.1629s0030 0.5kb downstream 0.5kb downstream 2183 true Scaffold1629: 164812-166994 Capsella grandiflora
Cagra.1629s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1629: 166495-166994 Capsella grandiflora
Cagra.1629s0030 1.0kb upstream 1.0kb upstream 2683 true Scaffold1629: 163812-166494 Capsella grandiflora
Cagra.1629s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1629: 163812-164811 Capsella grandiflora
Cagra.1629s0030 1.0kb downstream 1.0kb downstream 2683 true Scaffold1629: 164812-167494 Capsella grandiflora
Cagra.1629s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1629: 166495-167494 Capsella grandiflora
Cagra.1629s0030 2.0kb upstream 2.0kb upstream 3683 true Scaffold1629: 162812-166494 Capsella grandiflora
Cagra.1629s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1629: 162812-164811 Capsella grandiflora
Cagra.1629s0030 2.0kb downstream 2.0kb downstream 3683 true Scaffold1629: 164812-168494 Capsella grandiflora
Cagra.1629s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1629: 166495-168494 Capsella grandiflora
Cagra.1629s0030 5.0kb upstream 5.0kb upstream 6683 true Scaffold1629: 159812-166494 Capsella grandiflora
Cagra.1629s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1629: 159812-164811 Capsella grandiflora
Cagra.1629s0030 5.0kb downstream 5.0kb downstream 6683 true Scaffold1629: 164812-171494 Capsella grandiflora
Cagra.1629s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1629: 166495-171494 Capsella grandiflora
Cagra.1629s0030 10.0kb upstream 10.0kb upstream 11683 true Scaffold1629: 154812-166494 Capsella grandiflora
Cagra.1629s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1629: 154812-164811 Capsella grandiflora
Cagra.1629s0030 10.0kb downstream 10.0kb downstream 11683 true Scaffold1629: 164812-176494 Capsella grandiflora
Cagra.1629s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1629: 166495-176494 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367739 5261 Brassicaceae View MSA
123829201 5264 Brassicales-Malvales View MSA
124340231 5266 SBM View MSA
124244201 5268 Malvidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain