Gene : Cagra.1626s0040 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.99.18 - Cyclic pyranopterin phosphate synthase / Molybdenum cofactor biosynthesis protein 1 Genomic Order:  40
Name:  ? Cagra.1626s0040 Secondary Identifier:  ? PAC:28904409
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6823 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1626s0040 0.5kb upstream 0.5kb upstream 2629 true Scaffold1626: 151531-154159 Capsella grandiflora
Cagra.1626s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1626: 153660-154159 Capsella grandiflora
Cagra.1626s0040 0.5kb downstream 0.5kb downstream 2629 true Scaffold1626: 151031-153659 Capsella grandiflora
Cagra.1626s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1626: 151031-151530 Capsella grandiflora
Cagra.1626s0040 1.0kb upstream 1.0kb upstream 3129 true Scaffold1626: 151531-154659 Capsella grandiflora
Cagra.1626s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1626: 153660-154659 Capsella grandiflora
Cagra.1626s0040 1.0kb downstream 1.0kb downstream 3129 true Scaffold1626: 150531-153659 Capsella grandiflora
Cagra.1626s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1626: 150531-151530 Capsella grandiflora
Cagra.1626s0040 2.0kb upstream 2.0kb upstream 4129 true Scaffold1626: 151531-155659 Capsella grandiflora
Cagra.1626s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1626: 153660-155659 Capsella grandiflora
Cagra.1626s0040 2.0kb downstream 2.0kb downstream 4129 true Scaffold1626: 149531-153659 Capsella grandiflora
Cagra.1626s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1626: 149531-151530 Capsella grandiflora
Cagra.1626s0040 5.0kb upstream 5.0kb upstream 7129 true Scaffold1626: 151531-158659 Capsella grandiflora
Cagra.1626s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1626: 153660-158659 Capsella grandiflora
Cagra.1626s0040 5.0kb downstream 5.0kb downstream 7129 true Scaffold1626: 146531-153659 Capsella grandiflora
Cagra.1626s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1626: 146531-151530 Capsella grandiflora
Cagra.1626s0040 10.0kb upstream 10.0kb upstream 12129 true Scaffold1626: 151531-163659 Capsella grandiflora
Cagra.1626s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1626: 153660-163659 Capsella grandiflora
Cagra.1626s0040 10.0kb downstream 10.0kb downstream 12129 true Scaffold1626: 141531-153659 Capsella grandiflora
Cagra.1626s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1626: 141531-151530 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369830 5261 Brassicaceae View MSA
123830688 5264 Brassicales-Malvales View MSA
124337052 5266 SBM View MSA
124238954 5268 Malvidae View MSA
124063130 5270 Rosid View MSA
123740068 5271 Pentapetalae View MSA
122786980 5272 Eudicot View MSA
122042383 5273 Angiosperm View MSA
121347493 5274 Embryophyte View MSA
123426886 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain