Gene : Cagra.1626s0045 C. grandiflora v1.1
Defline:  (1 of 5) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  45
Name:  ? Cagra.1626s0045 Secondary Identifier:  ? PAC:28904441
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Ontology Annotation Displayer

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1626s0045 0.5kb upstream 0.5kb upstream 2028 true Scaffold1626: 182418-184445 Capsella grandiflora
Cagra.1626s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold1626: 183946-184445 Capsella grandiflora
Cagra.1626s0045 0.5kb downstream 0.5kb downstream 2028 true Scaffold1626: 181918-183945 Capsella grandiflora
Cagra.1626s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold1626: 181918-182417 Capsella grandiflora
Cagra.1626s0045 1.0kb upstream 1.0kb upstream 2528 true Scaffold1626: 182418-184945 Capsella grandiflora
Cagra.1626s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold1626: 183946-184945 Capsella grandiflora
Cagra.1626s0045 1.0kb downstream 1.0kb downstream 2528 true Scaffold1626: 181418-183945 Capsella grandiflora
Cagra.1626s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold1626: 181418-182417 Capsella grandiflora
Cagra.1626s0045 2.0kb upstream 2.0kb upstream 3528 true Scaffold1626: 182418-185945 Capsella grandiflora
Cagra.1626s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold1626: 183946-185945 Capsella grandiflora
Cagra.1626s0045 2.0kb downstream 2.0kb downstream 3528 true Scaffold1626: 180418-183945 Capsella grandiflora
Cagra.1626s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold1626: 180418-182417 Capsella grandiflora
Cagra.1626s0045 5.0kb upstream 5.0kb upstream 6528 true Scaffold1626: 182418-188945 Capsella grandiflora
Cagra.1626s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold1626: 183946-188945 Capsella grandiflora
Cagra.1626s0045 5.0kb downstream 5.0kb downstream 6528 true Scaffold1626: 177418-183945 Capsella grandiflora
Cagra.1626s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold1626: 177418-182417 Capsella grandiflora
Cagra.1626s0045 10.0kb upstream 10.0kb upstream 11528 true Scaffold1626: 182418-193945 Capsella grandiflora
Cagra.1626s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold1626: 183946-193945 Capsella grandiflora
Cagra.1626s0045 10.0kb downstream 10.0kb downstream 11528 true Scaffold1626: 172418-183945 Capsella grandiflora
Cagra.1626s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold1626: 172418-182417 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378004 5261 Brassicaceae View MSA
123840651 5264 Brassicales-Malvales View MSA
124346162 5266 SBM View MSA
124249254 5268 Malvidae View MSA
124060671 5270 Rosid View MSA
123748740 5271 Pentapetalae View MSA
122789686 5272 Eudicot View MSA
122042151 5273 Angiosperm View MSA
121350259 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain