Gene : Cagra.1613s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22844:SF202 - STOMATAL CYTOKINESIS DEFECTIVE Genomic Order:  4
Name:  ? Cagra.1613s0004 Secondary Identifier:  ? PAC:28917755
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1613s0004 0.5kb upstream 0.5kb upstream 10955 true Scaffold1613: 12033-22987 Capsella grandiflora
Cagra.1613s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1613: 22488-22987 Capsella grandiflora
Cagra.1613s0004 0.5kb downstream 0.5kb downstream 10955 true Scaffold1613: 11533-22487 Capsella grandiflora
Cagra.1613s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1613: 11533-12032 Capsella grandiflora
Cagra.1613s0004 1.0kb upstream 1.0kb upstream 11455 true Scaffold1613: 12033-23487 Capsella grandiflora
Cagra.1613s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1613: 22488-23487 Capsella grandiflora
Cagra.1613s0004 1.0kb downstream 1.0kb downstream 11455 true Scaffold1613: 11033-22487 Capsella grandiflora
Cagra.1613s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1613: 11033-12032 Capsella grandiflora
Cagra.1613s0004 2.0kb upstream 2.0kb upstream 12455 true Scaffold1613: 12033-24487 Capsella grandiflora
Cagra.1613s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1613: 22488-24487 Capsella grandiflora
Cagra.1613s0004 2.0kb downstream 2.0kb downstream 12455 true Scaffold1613: 10033-22487 Capsella grandiflora
Cagra.1613s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1613: 10033-12032 Capsella grandiflora
Cagra.1613s0004 5.0kb upstream 5.0kb upstream 15455 true Scaffold1613: 12033-27487 Capsella grandiflora
Cagra.1613s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1613: 22488-27487 Capsella grandiflora
Cagra.1613s0004 5.0kb downstream 5.0kb downstream 15455 true Scaffold1613: 7033-22487 Capsella grandiflora
Cagra.1613s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1613: 7033-12032 Capsella grandiflora
Cagra.1613s0004 10.0kb upstream 10.0kb upstream 20455 true Scaffold1613: 12033-32487 Capsella grandiflora
Cagra.1613s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1613: 22488-32487 Capsella grandiflora
Cagra.1613s0004 10.0kb downstream 10.0kb downstream 20455 true Scaffold1613: 2033-22487 Capsella grandiflora
Cagra.1613s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1613: 2033-12032 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366330 5261 Brassicaceae View MSA
123828000 5264 Brassicales-Malvales View MSA
124342011 5266 SBM View MSA
124241708 5268 Malvidae View MSA
124063489 5270 Rosid View MSA
123736587 5271 Pentapetalae View MSA
122787179 5272 Eudicot View MSA
122045572 5273 Angiosperm View MSA
121345381 5274 Embryophyte View MSA
123380209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain