Gene : Cagra.1562s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11076:SF12 - DNA REPAIR PROTEIN REV1 Genomic Order:  15
Name:  ? Cagra.1562s0015 Secondary Identifier:  ? PAC:28904653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0015 0.5kb upstream 0.5kb upstream 7162 true Scaffold1562: 55615-62776 Capsella grandiflora
Cagra.1562s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 55615-56114 Capsella grandiflora
Cagra.1562s0015 0.5kb downstream 0.5kb downstream 7162 true Scaffold1562: 56115-63276 Capsella grandiflora
Cagra.1562s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 62777-63276 Capsella grandiflora
Cagra.1562s0015 1.0kb upstream 1.0kb upstream 7662 true Scaffold1562: 55115-62776 Capsella grandiflora
Cagra.1562s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 55115-56114 Capsella grandiflora
Cagra.1562s0015 1.0kb downstream 1.0kb downstream 7662 true Scaffold1562: 56115-63776 Capsella grandiflora
Cagra.1562s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 62777-63776 Capsella grandiflora
Cagra.1562s0015 2.0kb upstream 2.0kb upstream 8662 true Scaffold1562: 54115-62776 Capsella grandiflora
Cagra.1562s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 54115-56114 Capsella grandiflora
Cagra.1562s0015 2.0kb downstream 2.0kb downstream 8662 true Scaffold1562: 56115-64776 Capsella grandiflora
Cagra.1562s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 62777-64776 Capsella grandiflora
Cagra.1562s0015 5.0kb upstream 5.0kb upstream 11662 true Scaffold1562: 51115-62776 Capsella grandiflora
Cagra.1562s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 51115-56114 Capsella grandiflora
Cagra.1562s0015 5.0kb downstream 5.0kb downstream 11662 true Scaffold1562: 56115-67776 Capsella grandiflora
Cagra.1562s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 62777-67776 Capsella grandiflora
Cagra.1562s0015 10.0kb upstream 10.0kb upstream 16662 true Scaffold1562: 46115-62776 Capsella grandiflora
Cagra.1562s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 46115-56114 Capsella grandiflora
Cagra.1562s0015 10.0kb downstream 10.0kb downstream 16662 true Scaffold1562: 56115-72776 Capsella grandiflora
Cagra.1562s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 62777-72776 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376697 5261 Brassicaceae View MSA
123831683 5264 Brassicales-Malvales View MSA
124342516 5266 SBM View MSA
124243287 5268 Malvidae View MSA
124061575 5270 Rosid View MSA
123740211 5271 Pentapetalae View MSA
122789510 5272 Eudicot View MSA
122041911 5273 Angiosperm View MSA
121346043 5274 Embryophyte View MSA
123380311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain