Gene : Cagra.1533s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10072//PTHR10072:SF51 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN Genomic Order:  4
Name:  ? Cagra.1533s0004 Secondary Identifier:  ? PAC:28912307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1533s0004 0.5kb upstream 0.5kb upstream 3411 true Scaffold1533: 9041-12451 Capsella grandiflora
Cagra.1533s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1533: 9041-9540 Capsella grandiflora
Cagra.1533s0004 0.5kb downstream 0.5kb downstream 3411 true Scaffold1533: 9541-12951 Capsella grandiflora
Cagra.1533s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1533: 12452-12951 Capsella grandiflora
Cagra.1533s0004 1.0kb upstream 1.0kb upstream 3911 true Scaffold1533: 8541-12451 Capsella grandiflora
Cagra.1533s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1533: 8541-9540 Capsella grandiflora
Cagra.1533s0004 1.0kb downstream 1.0kb downstream 3911 true Scaffold1533: 9541-13451 Capsella grandiflora
Cagra.1533s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1533: 12452-13451 Capsella grandiflora
Cagra.1533s0004 2.0kb upstream 2.0kb upstream 4911 true Scaffold1533: 7541-12451 Capsella grandiflora
Cagra.1533s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1533: 7541-9540 Capsella grandiflora
Cagra.1533s0004 2.0kb downstream 2.0kb downstream 4911 true Scaffold1533: 9541-14451 Capsella grandiflora
Cagra.1533s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1533: 12452-14451 Capsella grandiflora
Cagra.1533s0004 5.0kb upstream 5.0kb upstream 7911 true Scaffold1533: 4541-12451 Capsella grandiflora
Cagra.1533s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1533: 4541-9540 Capsella grandiflora
Cagra.1533s0004 5.0kb downstream 5.0kb downstream 7911 true Scaffold1533: 9541-17451 Capsella grandiflora
Cagra.1533s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1533: 12452-17451 Capsella grandiflora
Cagra.1533s0004 10.0kb upstream 10.0kb upstream 12451 true Scaffold1533: 1-12451 Capsella grandiflora
Cagra.1533s0004 10.0kb upstream 10.0kb upstream 9540 false Scaffold1533: 1-9540 Capsella grandiflora
Cagra.1533s0004 10.0kb downstream 10.0kb downstream 12911 true Scaffold1533: 9541-22451 Capsella grandiflora
Cagra.1533s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1533: 12452-22451 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375158 5261 Brassicaceae View MSA
123831098 5264 Brassicales-Malvales View MSA
124346700 5266 SBM View MSA
124249370 5268 Malvidae View MSA
124063872 5270 Rosid View MSA
123749019 5271 Pentapetalae View MSA
122797014 5272 Eudicot View MSA
122045205 5273 Angiosperm View MSA
121345103 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain