Gene : Cagra.1536s0004 C. grandiflora v1.1
Genomic Order:  4 Name:  ? Cagra.1536s0004
Secondary Identifier:  ? PAC:28894642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1536s0004 0.5kb upstream 0.5kb upstream 3733 true Scaffold1536: 12469-16201 Capsella grandiflora
Cagra.1536s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1536: 15702-16201 Capsella grandiflora
Cagra.1536s0004 0.5kb downstream 0.5kb downstream 3733 true Scaffold1536: 11969-15701 Capsella grandiflora
Cagra.1536s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1536: 11969-12468 Capsella grandiflora
Cagra.1536s0004 1.0kb upstream 1.0kb upstream 4233 true Scaffold1536: 12469-16701 Capsella grandiflora
Cagra.1536s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1536: 15702-16701 Capsella grandiflora
Cagra.1536s0004 1.0kb downstream 1.0kb downstream 4233 true Scaffold1536: 11469-15701 Capsella grandiflora
Cagra.1536s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1536: 11469-12468 Capsella grandiflora
Cagra.1536s0004 2.0kb upstream 2.0kb upstream 5233 true Scaffold1536: 12469-17701 Capsella grandiflora
Cagra.1536s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1536: 15702-17701 Capsella grandiflora
Cagra.1536s0004 2.0kb downstream 2.0kb downstream 5233 true Scaffold1536: 10469-15701 Capsella grandiflora
Cagra.1536s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1536: 10469-12468 Capsella grandiflora
Cagra.1536s0004 5.0kb upstream 5.0kb upstream 8233 true Scaffold1536: 12469-20701 Capsella grandiflora
Cagra.1536s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1536: 15702-20701 Capsella grandiflora
Cagra.1536s0004 5.0kb downstream 5.0kb downstream 8233 true Scaffold1536: 7469-15701 Capsella grandiflora
Cagra.1536s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1536: 7469-12468 Capsella grandiflora
Cagra.1536s0004 10.0kb upstream 10.0kb upstream 13233 true Scaffold1536: 12469-25701 Capsella grandiflora
Cagra.1536s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1536: 15702-25701 Capsella grandiflora
Cagra.1536s0004 10.0kb downstream 10.0kb downstream 13233 true Scaffold1536: 2469-15701 Capsella grandiflora
Cagra.1536s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1536: 2469-12468 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378277 5261 Brassicaceae View MSA
123836733 5264 Brassicales-Malvales View MSA
124346746 5266 SBM View MSA
124246122 5268 Malvidae View MSA
124069186 5270 Rosid View MSA
123747530 5271 Pentapetalae View MSA
122793265 5272 Eudicot View MSA
122043467 5273 Angiosperm View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain