Gene : Cagra.1561s0009 C. grandiflora v1.1
Defline:  (1 of 1) KOG2408 - Peroxidase/oxygenase Genomic Order:  9
Name:  ? Cagra.1561s0009 Secondary Identifier:  ? PAC:28907388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0009 0.5kb upstream 0.5kb upstream 3786 true Scaffold1561: 29219-33004 Capsella grandiflora
Cagra.1561s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 32505-33004 Capsella grandiflora
Cagra.1561s0009 0.5kb downstream 0.5kb downstream 3786 true Scaffold1561: 28719-32504 Capsella grandiflora
Cagra.1561s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 28719-29218 Capsella grandiflora
Cagra.1561s0009 1.0kb upstream 1.0kb upstream 4286 true Scaffold1561: 29219-33504 Capsella grandiflora
Cagra.1561s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 32505-33504 Capsella grandiflora
Cagra.1561s0009 1.0kb downstream 1.0kb downstream 4286 true Scaffold1561: 28219-32504 Capsella grandiflora
Cagra.1561s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 28219-29218 Capsella grandiflora
Cagra.1561s0009 2.0kb upstream 2.0kb upstream 5286 true Scaffold1561: 29219-34504 Capsella grandiflora
Cagra.1561s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 32505-34504 Capsella grandiflora
Cagra.1561s0009 2.0kb downstream 2.0kb downstream 5286 true Scaffold1561: 27219-32504 Capsella grandiflora
Cagra.1561s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 27219-29218 Capsella grandiflora
Cagra.1561s0009 5.0kb upstream 5.0kb upstream 8286 true Scaffold1561: 29219-37504 Capsella grandiflora
Cagra.1561s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 32505-37504 Capsella grandiflora
Cagra.1561s0009 5.0kb downstream 5.0kb downstream 8286 true Scaffold1561: 24219-32504 Capsella grandiflora
Cagra.1561s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 24219-29218 Capsella grandiflora
Cagra.1561s0009 10.0kb upstream 10.0kb upstream 13286 true Scaffold1561: 29219-42504 Capsella grandiflora
Cagra.1561s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 32505-42504 Capsella grandiflora
Cagra.1561s0009 10.0kb downstream 10.0kb downstream 13286 true Scaffold1561: 19219-32504 Capsella grandiflora
Cagra.1561s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 19219-29218 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367626 5261 Brassicaceae View MSA
123841250 5264 Brassicales-Malvales View MSA
124344099 5266 SBM View MSA
124241515 5268 Malvidae View MSA
124072334 5270 Rosid View MSA
123745708 5271 Pentapetalae View MSA
122788092 5272 Eudicot View MSA
122049602 5273 Angiosperm View MSA
121344304 5274 Embryophyte View MSA
123380019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain