Gene : Cagra.1508s0166 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24223:SF251 - ABC TRANSPORTER C FAMILY MEMBER 11-RELATED Genomic Order:  166
Name:  ? Cagra.1508s0166 Secondary Identifier:  ? PAC:28905770
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0166 0.5kb upstream 0.5kb upstream 9298 true Scaffold1508: 699887-709184 Capsella grandiflora
Cagra.1508s0166 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 708685-709184 Capsella grandiflora
Cagra.1508s0166 0.5kb downstream 0.5kb downstream 9298 true Scaffold1508: 699387-708684 Capsella grandiflora
Cagra.1508s0166 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 699387-699886 Capsella grandiflora
Cagra.1508s0166 1.0kb upstream 1.0kb upstream 9798 true Scaffold1508: 699887-709684 Capsella grandiflora
Cagra.1508s0166 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 708685-709684 Capsella grandiflora
Cagra.1508s0166 1.0kb downstream 1.0kb downstream 9798 true Scaffold1508: 698887-708684 Capsella grandiflora
Cagra.1508s0166 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 698887-699886 Capsella grandiflora
Cagra.1508s0166 2.0kb upstream 2.0kb upstream 10798 true Scaffold1508: 699887-710684 Capsella grandiflora
Cagra.1508s0166 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 708685-710684 Capsella grandiflora
Cagra.1508s0166 2.0kb downstream 2.0kb downstream 10798 true Scaffold1508: 697887-708684 Capsella grandiflora
Cagra.1508s0166 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 697887-699886 Capsella grandiflora
Cagra.1508s0166 5.0kb upstream 5.0kb upstream 13798 true Scaffold1508: 699887-713684 Capsella grandiflora
Cagra.1508s0166 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 708685-713684 Capsella grandiflora
Cagra.1508s0166 5.0kb downstream 5.0kb downstream 13798 true Scaffold1508: 694887-708684 Capsella grandiflora
Cagra.1508s0166 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 694887-699886 Capsella grandiflora
Cagra.1508s0166 10.0kb upstream 10.0kb upstream 18798 true Scaffold1508: 699887-718684 Capsella grandiflora
Cagra.1508s0166 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 708685-718684 Capsella grandiflora
Cagra.1508s0166 10.0kb downstream 10.0kb downstream 18798 true Scaffold1508: 689887-708684 Capsella grandiflora
Cagra.1508s0166 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 689887-699886 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367023 5261 Brassicaceae View MSA
123836335 5264 Brassicales-Malvales View MSA
124342526 5266 SBM View MSA
124240315 5268 Malvidae View MSA
124072921 5270 Rosid View MSA
123749375 5271 Pentapetalae View MSA
122797739 5272 Eudicot View MSA
122046236 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350391 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain