Gene : Cagra.1517s0022 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.1.165//2.1.1.9 - Methyl halide transferase / Methyl chloride transferase Genomic Order:  22
Name:  ? Cagra.1517s0022 Secondary Identifier:  ? PAC:28899391
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6730 Capsella grandiflora pathologic  
Cgrandiflora PWY-6736 Capsella grandiflora pathologic  
Cgrandiflora PWY-6842 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1517s0022 0.5kb upstream 0.5kb upstream 3022 true Scaffold1517: 64412-67433 Capsella grandiflora
Cagra.1517s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1517: 66934-67433 Capsella grandiflora
Cagra.1517s0022 0.5kb downstream 0.5kb downstream 3022 true Scaffold1517: 63912-66933 Capsella grandiflora
Cagra.1517s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1517: 63912-64411 Capsella grandiflora
Cagra.1517s0022 1.0kb upstream 1.0kb upstream 3522 true Scaffold1517: 64412-67933 Capsella grandiflora
Cagra.1517s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1517: 66934-67933 Capsella grandiflora
Cagra.1517s0022 1.0kb downstream 1.0kb downstream 3522 true Scaffold1517: 63412-66933 Capsella grandiflora
Cagra.1517s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1517: 63412-64411 Capsella grandiflora
Cagra.1517s0022 2.0kb upstream 2.0kb upstream 4522 true Scaffold1517: 64412-68933 Capsella grandiflora
Cagra.1517s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1517: 66934-68933 Capsella grandiflora
Cagra.1517s0022 2.0kb downstream 2.0kb downstream 4522 true Scaffold1517: 62412-66933 Capsella grandiflora
Cagra.1517s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1517: 62412-64411 Capsella grandiflora
Cagra.1517s0022 5.0kb upstream 5.0kb upstream 7522 true Scaffold1517: 64412-71933 Capsella grandiflora
Cagra.1517s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1517: 66934-71933 Capsella grandiflora
Cagra.1517s0022 5.0kb downstream 5.0kb downstream 7522 true Scaffold1517: 59412-66933 Capsella grandiflora
Cagra.1517s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1517: 59412-64411 Capsella grandiflora
Cagra.1517s0022 10.0kb upstream 10.0kb upstream 12522 true Scaffold1517: 64412-76933 Capsella grandiflora
Cagra.1517s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1517: 66934-76933 Capsella grandiflora
Cagra.1517s0022 10.0kb downstream 10.0kb downstream 12522 true Scaffold1517: 54412-66933 Capsella grandiflora
Cagra.1517s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1517: 54412-64411 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040998 5273 Angiosperm View MSA
122379294 5261 Brassicaceae View MSA
123802194 5264 Brassicales-Malvales View MSA
124299408 5266 SBM View MSA
124249928 5268 Malvidae View MSA
124062480 5270 Rosid View MSA
123741516 5271 Pentapetalae View MSA
122787358 5272 Eudicot View MSA
121346954 5274 Embryophyte View MSA
123424412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain