Gene : Cagra.1725s0060 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  60
Name:  ? Cagra.1725s0060 Secondary Identifier:  ? PAC:28896055
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0060 0.5kb upstream 0.5kb upstream 4869 true Scaffold1725: 235460-240328 Capsella grandiflora
Cagra.1725s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 239829-240328 Capsella grandiflora
Cagra.1725s0060 0.5kb downstream 0.5kb downstream 4869 true Scaffold1725: 234960-239828 Capsella grandiflora
Cagra.1725s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 234960-235459 Capsella grandiflora
Cagra.1725s0060 1.0kb upstream 1.0kb upstream 5369 true Scaffold1725: 235460-240828 Capsella grandiflora
Cagra.1725s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 239829-240828 Capsella grandiflora
Cagra.1725s0060 1.0kb downstream 1.0kb downstream 5369 true Scaffold1725: 234460-239828 Capsella grandiflora
Cagra.1725s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 234460-235459 Capsella grandiflora
Cagra.1725s0060 2.0kb upstream 2.0kb upstream 6369 true Scaffold1725: 235460-241828 Capsella grandiflora
Cagra.1725s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 239829-241828 Capsella grandiflora
Cagra.1725s0060 2.0kb downstream 2.0kb downstream 6369 true Scaffold1725: 233460-239828 Capsella grandiflora
Cagra.1725s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 233460-235459 Capsella grandiflora
Cagra.1725s0060 5.0kb upstream 5.0kb upstream 9369 true Scaffold1725: 235460-244828 Capsella grandiflora
Cagra.1725s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 239829-244828 Capsella grandiflora
Cagra.1725s0060 5.0kb downstream 5.0kb downstream 9369 true Scaffold1725: 230460-239828 Capsella grandiflora
Cagra.1725s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 230460-235459 Capsella grandiflora
Cagra.1725s0060 10.0kb upstream 10.0kb upstream 14369 true Scaffold1725: 235460-249828 Capsella grandiflora
Cagra.1725s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 239829-249828 Capsella grandiflora
Cagra.1725s0060 10.0kb downstream 10.0kb downstream 14369 true Scaffold1725: 225460-239828 Capsella grandiflora
Cagra.1725s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 225460-235459 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366269 5261 Brassicaceae View MSA
123838757 5264 Brassicales-Malvales View MSA
124322495 5266 SBM View MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain