Gene : Cagra.1725s0113 C. grandiflora v1.1

Defline:  (1 of 1) PTHR10992:SF898 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  113
Name:  ? Cagra.1725s0113 Secondary Identifier:  ? PAC:28896165

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0113 0.5kb upstream 0.5kb upstream 3438 true Scaffold1725: 429419-432856 Capsella grandiflora
Cagra.1725s0113 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 429419-429918 Capsella grandiflora
Cagra.1725s0113 0.5kb downstream 0.5kb downstream 3438 true Scaffold1725: 429919-433356 Capsella grandiflora
Cagra.1725s0113 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 432857-433356 Capsella grandiflora
Cagra.1725s0113 1.0kb upstream 1.0kb upstream 3938 true Scaffold1725: 428919-432856 Capsella grandiflora
Cagra.1725s0113 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 428919-429918 Capsella grandiflora
Cagra.1725s0113 1.0kb downstream 1.0kb downstream 3938 true Scaffold1725: 429919-433856 Capsella grandiflora
Cagra.1725s0113 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 432857-433856 Capsella grandiflora
Cagra.1725s0113 2.0kb upstream 2.0kb upstream 4938 true Scaffold1725: 427919-432856 Capsella grandiflora
Cagra.1725s0113 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 427919-429918 Capsella grandiflora
Cagra.1725s0113 2.0kb downstream 2.0kb downstream 4938 true Scaffold1725: 429919-434856 Capsella grandiflora
Cagra.1725s0113 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 432857-434856 Capsella grandiflora
Cagra.1725s0113 5.0kb upstream 5.0kb upstream 7938 true Scaffold1725: 424919-432856 Capsella grandiflora
Cagra.1725s0113 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 424919-429918 Capsella grandiflora
Cagra.1725s0113 5.0kb downstream 5.0kb downstream 7938 true Scaffold1725: 429919-437856 Capsella grandiflora
Cagra.1725s0113 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 432857-437856 Capsella grandiflora
Cagra.1725s0113 10.0kb upstream 10.0kb upstream 12938 true Scaffold1725: 419919-432856 Capsella grandiflora
Cagra.1725s0113 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 419919-429918 Capsella grandiflora
Cagra.1725s0113 10.0kb downstream 10.0kb downstream 12938 true Scaffold1725: 429919-442856 Capsella grandiflora
Cagra.1725s0113 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 432857-442856 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365006 5261 Brassicaceae View MSA
123837724 5264 Brassicales-Malvales View MSA
124339856 5266 SBM View MSA
124253798 5268 Malvidae View MSA
124065510 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain