Gene : Cagra.1725s0109 C. grandiflora v1.1
Defline:  (1 of 4) 1.14.11.15 - Gibberellin 3-beta-dioxygenase / Gibberellin 3-beta-hydroxylase Genomic Order:  109
Name:  ? Cagra.1725s0109 Secondary Identifier:  ? PAC:28896107
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5035 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0109 0.5kb upstream 0.5kb upstream 2118 true Scaffold1725: 417551-419668 Capsella grandiflora
Cagra.1725s0109 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 417551-418050 Capsella grandiflora
Cagra.1725s0109 0.5kb downstream 0.5kb downstream 2118 true Scaffold1725: 418051-420168 Capsella grandiflora
Cagra.1725s0109 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 419669-420168 Capsella grandiflora
Cagra.1725s0109 1.0kb upstream 1.0kb upstream 2618 true Scaffold1725: 417051-419668 Capsella grandiflora
Cagra.1725s0109 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 417051-418050 Capsella grandiflora
Cagra.1725s0109 1.0kb downstream 1.0kb downstream 2618 true Scaffold1725: 418051-420668 Capsella grandiflora
Cagra.1725s0109 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 419669-420668 Capsella grandiflora
Cagra.1725s0109 2.0kb upstream 2.0kb upstream 3618 true Scaffold1725: 416051-419668 Capsella grandiflora
Cagra.1725s0109 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 416051-418050 Capsella grandiflora
Cagra.1725s0109 2.0kb downstream 2.0kb downstream 3618 true Scaffold1725: 418051-421668 Capsella grandiflora
Cagra.1725s0109 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 419669-421668 Capsella grandiflora
Cagra.1725s0109 5.0kb upstream 5.0kb upstream 6618 true Scaffold1725: 413051-419668 Capsella grandiflora
Cagra.1725s0109 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 413051-418050 Capsella grandiflora
Cagra.1725s0109 5.0kb downstream 5.0kb downstream 6618 true Scaffold1725: 418051-424668 Capsella grandiflora
Cagra.1725s0109 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 419669-424668 Capsella grandiflora
Cagra.1725s0109 10.0kb upstream 10.0kb upstream 11618 true Scaffold1725: 408051-419668 Capsella grandiflora
Cagra.1725s0109 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 408051-418050 Capsella grandiflora
Cagra.1725s0109 10.0kb downstream 10.0kb downstream 11618 true Scaffold1725: 418051-429668 Capsella grandiflora
Cagra.1725s0109 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 419669-429668 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041105 5273 Angiosperm View MSA
122361985 5261 Brassicaceae View MSA
123839376 5264 Brassicales-Malvales View MSA
124342181 5266 SBM View MSA
124252902 5268 Malvidae View MSA
124070624 5270 Rosid View MSA
123753258 5271 Pentapetalae View MSA
122793066 5272 Eudicot View MSA
121349233 5274 Embryophyte View MSA
123381227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain