Gene : Cagra.1725s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12706 - STRAWBERRY NOTCH-RELATED Genomic Order:  9
Name:  ? Cagra.1725s0009 Secondary Identifier:  ? PAC:28896051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0009 0.5kb upstream 0.5kb upstream 9110 true Scaffold1725: 31466-40575 Capsella grandiflora
Cagra.1725s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 40076-40575 Capsella grandiflora
Cagra.1725s0009 0.5kb downstream 0.5kb downstream 9110 true Scaffold1725: 30966-40075 Capsella grandiflora
Cagra.1725s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 30966-31465 Capsella grandiflora
Cagra.1725s0009 1.0kb upstream 1.0kb upstream 9610 true Scaffold1725: 31466-41075 Capsella grandiflora
Cagra.1725s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 40076-41075 Capsella grandiflora
Cagra.1725s0009 1.0kb downstream 1.0kb downstream 9610 true Scaffold1725: 30466-40075 Capsella grandiflora
Cagra.1725s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 30466-31465 Capsella grandiflora
Cagra.1725s0009 2.0kb upstream 2.0kb upstream 10610 true Scaffold1725: 31466-42075 Capsella grandiflora
Cagra.1725s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 40076-42075 Capsella grandiflora
Cagra.1725s0009 2.0kb downstream 2.0kb downstream 10610 true Scaffold1725: 29466-40075 Capsella grandiflora
Cagra.1725s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 29466-31465 Capsella grandiflora
Cagra.1725s0009 5.0kb upstream 5.0kb upstream 13610 true Scaffold1725: 31466-45075 Capsella grandiflora
Cagra.1725s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 40076-45075 Capsella grandiflora
Cagra.1725s0009 5.0kb downstream 5.0kb downstream 13610 true Scaffold1725: 26466-40075 Capsella grandiflora
Cagra.1725s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 26466-31465 Capsella grandiflora
Cagra.1725s0009 10.0kb upstream 10.0kb upstream 18610 true Scaffold1725: 31466-50075 Capsella grandiflora
Cagra.1725s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 40076-50075 Capsella grandiflora
Cagra.1725s0009 10.0kb downstream 10.0kb downstream 18610 true Scaffold1725: 21466-40075 Capsella grandiflora
Cagra.1725s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 21466-31465 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376620 5261 Brassicaceae View MSA
123829424 5264 Brassicales-Malvales View MSA
124347260 5266 SBM View MSA
124251905 5268 Malvidae View MSA
124065554 5270 Rosid View MSA
123742096 5271 Pentapetalae View MSA
122786510 5272 Eudicot View MSA
122045253 5273 Angiosperm View MSA
121344716 5274 Embryophyte View MSA
123424908 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain