Gene : Cagra.1725s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  39
Name:  ? Cagra.1725s0039 Secondary Identifier:  ? PAC:28896177
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0039 0.5kb upstream 0.5kb upstream 3872 true Scaffold1725: 159380-163251 Capsella grandiflora
Cagra.1725s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 162752-163251 Capsella grandiflora
Cagra.1725s0039 0.5kb downstream 0.5kb downstream 3872 true Scaffold1725: 158880-162751 Capsella grandiflora
Cagra.1725s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 158880-159379 Capsella grandiflora
Cagra.1725s0039 1.0kb upstream 1.0kb upstream 4372 true Scaffold1725: 159380-163751 Capsella grandiflora
Cagra.1725s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 162752-163751 Capsella grandiflora
Cagra.1725s0039 1.0kb downstream 1.0kb downstream 4372 true Scaffold1725: 158380-162751 Capsella grandiflora
Cagra.1725s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 158380-159379 Capsella grandiflora
Cagra.1725s0039 2.0kb upstream 2.0kb upstream 5372 true Scaffold1725: 159380-164751 Capsella grandiflora
Cagra.1725s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 162752-164751 Capsella grandiflora
Cagra.1725s0039 2.0kb downstream 2.0kb downstream 5372 true Scaffold1725: 157380-162751 Capsella grandiflora
Cagra.1725s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 157380-159379 Capsella grandiflora
Cagra.1725s0039 5.0kb upstream 5.0kb upstream 8372 true Scaffold1725: 159380-167751 Capsella grandiflora
Cagra.1725s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 162752-167751 Capsella grandiflora
Cagra.1725s0039 5.0kb downstream 5.0kb downstream 8372 true Scaffold1725: 154380-162751 Capsella grandiflora
Cagra.1725s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 154380-159379 Capsella grandiflora
Cagra.1725s0039 10.0kb upstream 10.0kb upstream 13372 true Scaffold1725: 159380-172751 Capsella grandiflora
Cagra.1725s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 162752-172751 Capsella grandiflora
Cagra.1725s0039 10.0kb downstream 10.0kb downstream 13372 true Scaffold1725: 149380-162751 Capsella grandiflora
Cagra.1725s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 149380-159379 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370260 5261 Brassicaceae View MSA
123839172 5264 Brassicales-Malvales View MSA
124341735 5266 SBM View MSA
124250812 5268 Malvidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain