Gene : Cagra.1671s0379 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  379
Name:  ? Cagra.1671s0379 Secondary Identifier:  ? PAC:28914071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0379 0.5kb upstream 0.5kb upstream 2368 true Scaffold1671: 1365565-1367932 Capsella grandiflora
Cagra.1671s0379 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1367433-1367932 Capsella grandiflora
Cagra.1671s0379 0.5kb downstream 0.5kb downstream 2368 true Scaffold1671: 1365065-1367432 Capsella grandiflora
Cagra.1671s0379 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1365065-1365564 Capsella grandiflora
Cagra.1671s0379 1.0kb upstream 1.0kb upstream 2868 true Scaffold1671: 1365565-1368432 Capsella grandiflora
Cagra.1671s0379 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1367433-1368432 Capsella grandiflora
Cagra.1671s0379 1.0kb downstream 1.0kb downstream 2868 true Scaffold1671: 1364565-1367432 Capsella grandiflora
Cagra.1671s0379 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1364565-1365564 Capsella grandiflora
Cagra.1671s0379 2.0kb upstream 2.0kb upstream 3868 true Scaffold1671: 1365565-1369432 Capsella grandiflora
Cagra.1671s0379 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1367433-1369432 Capsella grandiflora
Cagra.1671s0379 2.0kb downstream 2.0kb downstream 3868 true Scaffold1671: 1363565-1367432 Capsella grandiflora
Cagra.1671s0379 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1363565-1365564 Capsella grandiflora
Cagra.1671s0379 5.0kb upstream 5.0kb upstream 6868 true Scaffold1671: 1365565-1372432 Capsella grandiflora
Cagra.1671s0379 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1367433-1372432 Capsella grandiflora
Cagra.1671s0379 5.0kb downstream 5.0kb downstream 6868 true Scaffold1671: 1360565-1367432 Capsella grandiflora
Cagra.1671s0379 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1360565-1365564 Capsella grandiflora
Cagra.1671s0379 10.0kb upstream 10.0kb upstream 11868 true Scaffold1671: 1365565-1377432 Capsella grandiflora
Cagra.1671s0379 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1367433-1377432 Capsella grandiflora
Cagra.1671s0379 10.0kb downstream 10.0kb downstream 11868 true Scaffold1671: 1355565-1367432 Capsella grandiflora
Cagra.1671s0379 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1355565-1365564 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360384 5261 Brassicaceae View MSA
123828848 5264 Brassicales-Malvales View MSA
124339354 5266 SBM View MSA
124242791 5268 Malvidae View MSA
124062524 5270 Rosid View MSA
123736942 5271 Pentapetalae View MSA
122790560 5272 Eudicot View MSA
122046804 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain