Gene : Cagra.1671s0300 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11467:SF48 - HISTONE H1.1-RELATED Genomic Order:  300
Name:  ? Cagra.1671s0300 Secondary Identifier:  ? PAC:28913909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0300 0.5kb upstream 0.5kb upstream 1660 true Scaffold1671: 1097709-1099368 Capsella grandiflora
Cagra.1671s0300 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1098869-1099368 Capsella grandiflora
Cagra.1671s0300 0.5kb downstream 0.5kb downstream 1660 true Scaffold1671: 1097209-1098868 Capsella grandiflora
Cagra.1671s0300 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1097209-1097708 Capsella grandiflora
Cagra.1671s0300 1.0kb upstream 1.0kb upstream 2160 true Scaffold1671: 1097709-1099868 Capsella grandiflora
Cagra.1671s0300 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1098869-1099868 Capsella grandiflora
Cagra.1671s0300 1.0kb downstream 1.0kb downstream 2160 true Scaffold1671: 1096709-1098868 Capsella grandiflora
Cagra.1671s0300 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1096709-1097708 Capsella grandiflora
Cagra.1671s0300 2.0kb upstream 2.0kb upstream 3160 true Scaffold1671: 1097709-1100868 Capsella grandiflora
Cagra.1671s0300 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1098869-1100868 Capsella grandiflora
Cagra.1671s0300 2.0kb downstream 2.0kb downstream 3160 true Scaffold1671: 1095709-1098868 Capsella grandiflora
Cagra.1671s0300 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1095709-1097708 Capsella grandiflora
Cagra.1671s0300 5.0kb upstream 5.0kb upstream 6160 true Scaffold1671: 1097709-1103868 Capsella grandiflora
Cagra.1671s0300 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1098869-1103868 Capsella grandiflora
Cagra.1671s0300 5.0kb downstream 5.0kb downstream 6160 true Scaffold1671: 1092709-1098868 Capsella grandiflora
Cagra.1671s0300 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1092709-1097708 Capsella grandiflora
Cagra.1671s0300 10.0kb upstream 10.0kb upstream 11160 true Scaffold1671: 1097709-1108868 Capsella grandiflora
Cagra.1671s0300 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1098869-1108868 Capsella grandiflora
Cagra.1671s0300 10.0kb downstream 10.0kb downstream 11160 true Scaffold1671: 1087709-1098868 Capsella grandiflora
Cagra.1671s0300 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1087709-1097708 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365452 5261 Brassicaceae View MSA
123798959 5264 Brassicales-Malvales View MSA
124296531 5266 SBM View MSA
124250216 5268 Malvidae View MSA
124071858 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain