Gene : Cagra.1671s0101 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10943//PTHR10943:SF3 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Genomic Order:  101
Name:  ? Cagra.1671s0101 Secondary Identifier:  ? PAC:28913938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0101 0.5kb upstream 0.5kb upstream 5973 true Scaffold1671: 386108-392080 Capsella grandiflora
Cagra.1671s0101 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 386108-386607 Capsella grandiflora
Cagra.1671s0101 0.5kb downstream 0.5kb downstream 5973 true Scaffold1671: 386608-392580 Capsella grandiflora
Cagra.1671s0101 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 392081-392580 Capsella grandiflora
Cagra.1671s0101 1.0kb upstream 1.0kb upstream 6473 true Scaffold1671: 385608-392080 Capsella grandiflora
Cagra.1671s0101 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 385608-386607 Capsella grandiflora
Cagra.1671s0101 1.0kb downstream 1.0kb downstream 6473 true Scaffold1671: 386608-393080 Capsella grandiflora
Cagra.1671s0101 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 392081-393080 Capsella grandiflora
Cagra.1671s0101 2.0kb upstream 2.0kb upstream 7473 true Scaffold1671: 384608-392080 Capsella grandiflora
Cagra.1671s0101 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 384608-386607 Capsella grandiflora
Cagra.1671s0101 2.0kb downstream 2.0kb downstream 7473 true Scaffold1671: 386608-394080 Capsella grandiflora
Cagra.1671s0101 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 392081-394080 Capsella grandiflora
Cagra.1671s0101 5.0kb upstream 5.0kb upstream 10473 true Scaffold1671: 381608-392080 Capsella grandiflora
Cagra.1671s0101 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 381608-386607 Capsella grandiflora
Cagra.1671s0101 5.0kb downstream 5.0kb downstream 10473 true Scaffold1671: 386608-397080 Capsella grandiflora
Cagra.1671s0101 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 392081-397080 Capsella grandiflora
Cagra.1671s0101 10.0kb upstream 10.0kb upstream 15473 true Scaffold1671: 376608-392080 Capsella grandiflora
Cagra.1671s0101 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 376608-386607 Capsella grandiflora
Cagra.1671s0101 10.0kb downstream 10.0kb downstream 15473 true Scaffold1671: 386608-402080 Capsella grandiflora
Cagra.1671s0101 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 392081-402080 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041470 5273 Angiosperm View MSA
122377386 5261 Brassicaceae View MSA
123801519 5264 Brassicales-Malvales View MSA
124298812 5266 SBM View MSA
124150372 5268 Malvidae View MSA
123875996 5270 Rosid View MSA
123459734 5271 Pentapetalae View MSA
122495122 5272 Eudicot View MSA
121346928 5274 Embryophyte View MSA
123424090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain