Gene : Cagra.1671s0120 C. grandiflora v1.1
Defline:  (1 of 4) KOG1572 - Predicted protein tyrosine phosphatase Genomic Order:  120
Name:  ? Cagra.1671s0120 Secondary Identifier:  ? PAC:28914168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0120 0.5kb upstream 0.5kb upstream 3901 true Scaffold1671: 461201-465101 Capsella grandiflora
Cagra.1671s0120 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 461201-461700 Capsella grandiflora
Cagra.1671s0120 0.5kb downstream 0.5kb downstream 3901 true Scaffold1671: 461701-465601 Capsella grandiflora
Cagra.1671s0120 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 465102-465601 Capsella grandiflora
Cagra.1671s0120 1.0kb upstream 1.0kb upstream 4401 true Scaffold1671: 460701-465101 Capsella grandiflora
Cagra.1671s0120 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 460701-461700 Capsella grandiflora
Cagra.1671s0120 1.0kb downstream 1.0kb downstream 4401 true Scaffold1671: 461701-466101 Capsella grandiflora
Cagra.1671s0120 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 465102-466101 Capsella grandiflora
Cagra.1671s0120 2.0kb upstream 2.0kb upstream 5401 true Scaffold1671: 459701-465101 Capsella grandiflora
Cagra.1671s0120 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 459701-461700 Capsella grandiflora
Cagra.1671s0120 2.0kb downstream 2.0kb downstream 5401 true Scaffold1671: 461701-467101 Capsella grandiflora
Cagra.1671s0120 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 465102-467101 Capsella grandiflora
Cagra.1671s0120 5.0kb upstream 5.0kb upstream 8401 true Scaffold1671: 456701-465101 Capsella grandiflora
Cagra.1671s0120 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 456701-461700 Capsella grandiflora
Cagra.1671s0120 5.0kb downstream 5.0kb downstream 8401 true Scaffold1671: 461701-470101 Capsella grandiflora
Cagra.1671s0120 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 465102-470101 Capsella grandiflora
Cagra.1671s0120 10.0kb upstream 10.0kb upstream 13401 true Scaffold1671: 451701-465101 Capsella grandiflora
Cagra.1671s0120 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 451701-461700 Capsella grandiflora
Cagra.1671s0120 10.0kb downstream 10.0kb downstream 13401 true Scaffold1671: 461701-475101 Capsella grandiflora
Cagra.1671s0120 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 465102-475101 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365985 5261 Brassicaceae View MSA
123837881 5264 Brassicales-Malvales View MSA
124346848 5266 SBM View MSA
124252278 5268 Malvidae View MSA
124073099 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain