Gene : Cagra.1671s0042 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  42
Name:  ? Cagra.1671s0042 Secondary Identifier:  ? PAC:28914312
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0042 0.5kb upstream 0.5kb upstream 2495 true Scaffold1671: 166527-169021 Capsella grandiflora
Cagra.1671s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 166527-167026 Capsella grandiflora
Cagra.1671s0042 0.5kb downstream 0.5kb downstream 2495 true Scaffold1671: 167027-169521 Capsella grandiflora
Cagra.1671s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 169022-169521 Capsella grandiflora
Cagra.1671s0042 1.0kb upstream 1.0kb upstream 2995 true Scaffold1671: 166027-169021 Capsella grandiflora
Cagra.1671s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 166027-167026 Capsella grandiflora
Cagra.1671s0042 1.0kb downstream 1.0kb downstream 2995 true Scaffold1671: 167027-170021 Capsella grandiflora
Cagra.1671s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 169022-170021 Capsella grandiflora
Cagra.1671s0042 2.0kb upstream 2.0kb upstream 3995 true Scaffold1671: 165027-169021 Capsella grandiflora
Cagra.1671s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 165027-167026 Capsella grandiflora
Cagra.1671s0042 2.0kb downstream 2.0kb downstream 3995 true Scaffold1671: 167027-171021 Capsella grandiflora
Cagra.1671s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 169022-171021 Capsella grandiflora
Cagra.1671s0042 5.0kb upstream 5.0kb upstream 6995 true Scaffold1671: 162027-169021 Capsella grandiflora
Cagra.1671s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 162027-167026 Capsella grandiflora
Cagra.1671s0042 5.0kb downstream 5.0kb downstream 6995 true Scaffold1671: 167027-174021 Capsella grandiflora
Cagra.1671s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 169022-174021 Capsella grandiflora
Cagra.1671s0042 10.0kb upstream 10.0kb upstream 11995 true Scaffold1671: 157027-169021 Capsella grandiflora
Cagra.1671s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 157027-167026 Capsella grandiflora
Cagra.1671s0042 10.0kb downstream 10.0kb downstream 11995 true Scaffold1671: 167027-179021 Capsella grandiflora
Cagra.1671s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 169022-179021 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379489 5261 Brassicaceae View MSA
123802296 5264 Brassicales-Malvales View MSA
124299505 5266 SBM View MSA
124150901 5268 Malvidae View MSA
123876438 5270 Rosid View MSA
123460116 5271 Pentapetalae View MSA
122495495 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain