Gene : Cagra.1658s0006 C. grandiflora v1.1
Defline:  (1 of 12) PTHR23073 - 26S PROTEASE REGULATORY SUBUNIT Genomic Order:  6
Name:  ? Cagra.1658s0006 Secondary Identifier:  ? PAC:28907204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1658s0006 0.5kb upstream 0.5kb upstream 3345 true Scaffold1658: 16922-20266 Capsella grandiflora
Cagra.1658s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1658: 19767-20266 Capsella grandiflora
Cagra.1658s0006 0.5kb downstream 0.5kb downstream 3345 true Scaffold1658: 16422-19766 Capsella grandiflora
Cagra.1658s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1658: 16422-16921 Capsella grandiflora
Cagra.1658s0006 1.0kb upstream 1.0kb upstream 3845 true Scaffold1658: 16922-20766 Capsella grandiflora
Cagra.1658s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1658: 19767-20766 Capsella grandiflora
Cagra.1658s0006 1.0kb downstream 1.0kb downstream 3845 true Scaffold1658: 15922-19766 Capsella grandiflora
Cagra.1658s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1658: 15922-16921 Capsella grandiflora
Cagra.1658s0006 2.0kb upstream 2.0kb upstream 4845 true Scaffold1658: 16922-21766 Capsella grandiflora
Cagra.1658s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1658: 19767-21766 Capsella grandiflora
Cagra.1658s0006 2.0kb downstream 2.0kb downstream 4845 true Scaffold1658: 14922-19766 Capsella grandiflora
Cagra.1658s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1658: 14922-16921 Capsella grandiflora
Cagra.1658s0006 5.0kb upstream 5.0kb upstream 7845 true Scaffold1658: 16922-24766 Capsella grandiflora
Cagra.1658s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1658: 19767-24766 Capsella grandiflora
Cagra.1658s0006 5.0kb downstream 5.0kb downstream 7845 true Scaffold1658: 11922-19766 Capsella grandiflora
Cagra.1658s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1658: 11922-16921 Capsella grandiflora
Cagra.1658s0006 10.0kb upstream 10.0kb upstream 12845 true Scaffold1658: 16922-29766 Capsella grandiflora
Cagra.1658s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1658: 19767-29766 Capsella grandiflora
Cagra.1658s0006 10.0kb downstream 10.0kb downstream 12845 true Scaffold1658: 6922-19766 Capsella grandiflora
Cagra.1658s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1658: 6922-16921 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380563 5261 Brassicaceae View MSA
123835481 5264 Brassicales-Malvales View MSA
124347763 5266 SBM View MSA
124252896 5268 Malvidae View MSA
124068785 5270 Rosid View MSA
123737965 5271 Pentapetalae View MSA
122792051 5272 Eudicot View MSA
122047363 5273 Angiosperm View MSA
121351004 5274 Embryophyte View MSA
123424117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain