Gene : Cagra.1663s0005 C. grandiflora v1.1
Genomic Order:  5 Name:  ? Cagra.1663s0005
Secondary Identifier:  ? PAC:28912521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1663s0005 0.5kb upstream 0.5kb upstream 1971 true Scaffold1663: 14651-16621 Capsella grandiflora
Cagra.1663s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1663: 14651-15150 Capsella grandiflora
Cagra.1663s0005 0.5kb downstream 0.5kb downstream 1971 true Scaffold1663: 15151-17121 Capsella grandiflora
Cagra.1663s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1663: 16622-17121 Capsella grandiflora
Cagra.1663s0005 1.0kb upstream 1.0kb upstream 2471 true Scaffold1663: 14151-16621 Capsella grandiflora
Cagra.1663s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1663: 14151-15150 Capsella grandiflora
Cagra.1663s0005 1.0kb downstream 1.0kb downstream 2471 true Scaffold1663: 15151-17621 Capsella grandiflora
Cagra.1663s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1663: 16622-17621 Capsella grandiflora
Cagra.1663s0005 2.0kb upstream 2.0kb upstream 3471 true Scaffold1663: 13151-16621 Capsella grandiflora
Cagra.1663s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1663: 13151-15150 Capsella grandiflora
Cagra.1663s0005 2.0kb downstream 2.0kb downstream 3471 true Scaffold1663: 15151-18621 Capsella grandiflora
Cagra.1663s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1663: 16622-18621 Capsella grandiflora
Cagra.1663s0005 5.0kb upstream 5.0kb upstream 6471 true Scaffold1663: 10151-16621 Capsella grandiflora
Cagra.1663s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1663: 10151-15150 Capsella grandiflora
Cagra.1663s0005 5.0kb downstream 5.0kb downstream 6471 true Scaffold1663: 15151-21621 Capsella grandiflora
Cagra.1663s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1663: 16622-21621 Capsella grandiflora
Cagra.1663s0005 10.0kb upstream 10.0kb upstream 11471 true Scaffold1663: 5151-16621 Capsella grandiflora
Cagra.1663s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1663: 5151-15150 Capsella grandiflora
Cagra.1663s0005 10.0kb downstream 10.0kb downstream 9727 true Scaffold1663: 15151-24877 Capsella grandiflora
Cagra.1663s0005 10.0kb downstream 10.0kb downstream 8256 false Scaffold1663: 16622-24877 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377090 5261 Brassicaceae View MSA
123829109 5264 Brassicales-Malvales View MSA
124339536 5266 SBM View MSA
124253017 5268 Malvidae View MSA
124064157 5270 Rosid View MSA
123751036 5271 Pentapetalae View MSA
122794078 5272 Eudicot View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain