Gene : Cagra.1663s0003 C. grandiflora v1.1
Defline:  (1 of 19) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  3
Name:  ? Cagra.1663s0003 Secondary Identifier:  ? PAC:28912519
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1663s0003 0.5kb upstream 0.5kb upstream 2640 true Scaffold1663: 8037-10676 Capsella grandiflora
Cagra.1663s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1663: 8037-8536 Capsella grandiflora
Cagra.1663s0003 0.5kb downstream 0.5kb downstream 2640 true Scaffold1663: 8537-11176 Capsella grandiflora
Cagra.1663s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1663: 10677-11176 Capsella grandiflora
Cagra.1663s0003 1.0kb upstream 1.0kb upstream 3140 true Scaffold1663: 7537-10676 Capsella grandiflora
Cagra.1663s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1663: 7537-8536 Capsella grandiflora
Cagra.1663s0003 1.0kb downstream 1.0kb downstream 3140 true Scaffold1663: 8537-11676 Capsella grandiflora
Cagra.1663s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1663: 10677-11676 Capsella grandiflora
Cagra.1663s0003 2.0kb upstream 2.0kb upstream 4140 true Scaffold1663: 6537-10676 Capsella grandiflora
Cagra.1663s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1663: 6537-8536 Capsella grandiflora
Cagra.1663s0003 2.0kb downstream 2.0kb downstream 4140 true Scaffold1663: 8537-12676 Capsella grandiflora
Cagra.1663s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1663: 10677-12676 Capsella grandiflora
Cagra.1663s0003 5.0kb upstream 5.0kb upstream 7140 true Scaffold1663: 3537-10676 Capsella grandiflora
Cagra.1663s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1663: 3537-8536 Capsella grandiflora
Cagra.1663s0003 5.0kb downstream 5.0kb downstream 7140 true Scaffold1663: 8537-15676 Capsella grandiflora
Cagra.1663s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1663: 10677-15676 Capsella grandiflora
Cagra.1663s0003 10.0kb upstream 10.0kb upstream 10676 true Scaffold1663: 1-10676 Capsella grandiflora
Cagra.1663s0003 10.0kb upstream 10.0kb upstream 8536 false Scaffold1663: 1-8536 Capsella grandiflora
Cagra.1663s0003 10.0kb downstream 10.0kb downstream 12140 true Scaffold1663: 8537-20676 Capsella grandiflora
Cagra.1663s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1663: 10677-20676 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381411 5261 Brassicaceae View MSA
123803228 5264 Brassicales-Malvales View MSA
124300353 5266 SBM View MSA
124151552 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain