Gene : Cagra.1663s0001 C. grandiflora v1.1
Defline:  (1 of 19) PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED Genomic Order:  1
Name:  ? Cagra.1663s0001 Secondary Identifier:  ? PAC:28912520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1663s0001 0.5kb upstream 0.5kb upstream 2587 true Scaffold1663: 203-2789 Capsella grandiflora
Cagra.1663s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1663: 2290-2789 Capsella grandiflora
Cagra.1663s0001 0.5kb downstream 0.5kb downstream 2289 true Scaffold1663: 1-2289 Capsella grandiflora
Cagra.1663s0001 0.5kb downstream 0.5kb downstream 202 false Scaffold1663: 1-202 Capsella grandiflora
Cagra.1663s0001 1.0kb upstream 1.0kb upstream 3087 true Scaffold1663: 203-3289 Capsella grandiflora
Cagra.1663s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1663: 2290-3289 Capsella grandiflora
Cagra.1663s0001 1.0kb downstream 1.0kb downstream 2289 true Scaffold1663: 1-2289 Capsella grandiflora
Cagra.1663s0001 1.0kb downstream 1.0kb downstream 202 false Scaffold1663: 1-202 Capsella grandiflora
Cagra.1663s0001 2.0kb upstream 2.0kb upstream 4087 true Scaffold1663: 203-4289 Capsella grandiflora
Cagra.1663s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1663: 2290-4289 Capsella grandiflora
Cagra.1663s0001 2.0kb downstream 2.0kb downstream 2289 true Scaffold1663: 1-2289 Capsella grandiflora
Cagra.1663s0001 2.0kb downstream 2.0kb downstream 202 false Scaffold1663: 1-202 Capsella grandiflora
Cagra.1663s0001 5.0kb upstream 5.0kb upstream 7087 true Scaffold1663: 203-7289 Capsella grandiflora
Cagra.1663s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1663: 2290-7289 Capsella grandiflora
Cagra.1663s0001 5.0kb downstream 5.0kb downstream 2289 true Scaffold1663: 1-2289 Capsella grandiflora
Cagra.1663s0001 5.0kb downstream 5.0kb downstream 202 false Scaffold1663: 1-202 Capsella grandiflora
Cagra.1663s0001 10.0kb upstream 10.0kb upstream 12087 true Scaffold1663: 203-12289 Capsella grandiflora
Cagra.1663s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold1663: 2290-12289 Capsella grandiflora
Cagra.1663s0001 10.0kb downstream 10.0kb downstream 2289 true Scaffold1663: 1-2289 Capsella grandiflora
Cagra.1663s0001 10.0kb downstream 10.0kb downstream 202 false Scaffold1663: 1-202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381411 5261 Brassicaceae View MSA
123803228 5264 Brassicales-Malvales View MSA
124300353 5266 SBM View MSA
124151552 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain