Gene : Cagra.1914s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22958 - RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED Genomic Order:  16
Name:  ? Cagra.1914s0016 Secondary Identifier:  ? PAC:28901326
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7409 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1914s0016 0.5kb upstream 0.5kb upstream 2990 true Scaffold1914: 78952-81941 Capsella grandiflora
Cagra.1914s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold1914: 81442-81941 Capsella grandiflora
Cagra.1914s0016 0.5kb downstream 0.5kb downstream 2990 true Scaffold1914: 78452-81441 Capsella grandiflora
Cagra.1914s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold1914: 78452-78951 Capsella grandiflora
Cagra.1914s0016 1.0kb upstream 1.0kb upstream 3490 true Scaffold1914: 78952-82441 Capsella grandiflora
Cagra.1914s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold1914: 81442-82441 Capsella grandiflora
Cagra.1914s0016 1.0kb downstream 1.0kb downstream 3490 true Scaffold1914: 77952-81441 Capsella grandiflora
Cagra.1914s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold1914: 77952-78951 Capsella grandiflora
Cagra.1914s0016 2.0kb upstream 2.0kb upstream 4490 true Scaffold1914: 78952-83441 Capsella grandiflora
Cagra.1914s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold1914: 81442-83441 Capsella grandiflora
Cagra.1914s0016 2.0kb downstream 2.0kb downstream 4490 true Scaffold1914: 76952-81441 Capsella grandiflora
Cagra.1914s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold1914: 76952-78951 Capsella grandiflora
Cagra.1914s0016 5.0kb upstream 5.0kb upstream 7490 true Scaffold1914: 78952-86441 Capsella grandiflora
Cagra.1914s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold1914: 81442-86441 Capsella grandiflora
Cagra.1914s0016 5.0kb downstream 5.0kb downstream 7490 true Scaffold1914: 73952-81441 Capsella grandiflora
Cagra.1914s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold1914: 73952-78951 Capsella grandiflora
Cagra.1914s0016 10.0kb upstream 10.0kb upstream 12490 true Scaffold1914: 78952-91441 Capsella grandiflora
Cagra.1914s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold1914: 81442-91441 Capsella grandiflora
Cagra.1914s0016 10.0kb downstream 10.0kb downstream 12490 true Scaffold1914: 68952-81441 Capsella grandiflora
Cagra.1914s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold1914: 68952-78951 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368993 5261 Brassicaceae View MSA
123835487 5264 Brassicales-Malvales View MSA
124344665 5266 SBM View MSA
124241835 5268 Malvidae View MSA
124061508 5270 Rosid View MSA
123747785 5271 Pentapetalae View MSA
122794114 5272 Eudicot View MSA
122041847 5273 Angiosperm View MSA
123429151 5275 Viridiplantae View MSA
121351088 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain