Gene : Cagra.1952s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE Genomic Order:  1
Name:  ? Cagra.1952s0001 Secondary Identifier:  ? PAC:28898214
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1952s0001 0.5kb upstream 0.5kb upstream 1914 true Scaffold1952: 1-1914 Capsella grandiflora
Cagra.1952s0001 0.5kb upstream 0.5kb upstream 414 false Scaffold1952: 1-414 Capsella grandiflora
Cagra.1952s0001 0.5kb downstream 0.5kb downstream 2000 true Scaffold1952: 415-2414 Capsella grandiflora
Cagra.1952s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1952: 1915-2414 Capsella grandiflora
Cagra.1952s0001 1.0kb upstream 1.0kb upstream 1914 true Scaffold1952: 1-1914 Capsella grandiflora
Cagra.1952s0001 1.0kb upstream 1.0kb upstream 414 false Scaffold1952: 1-414 Capsella grandiflora
Cagra.1952s0001 1.0kb downstream 1.0kb downstream 2500 true Scaffold1952: 415-2914 Capsella grandiflora
Cagra.1952s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1952: 1915-2914 Capsella grandiflora
Cagra.1952s0001 2.0kb upstream 2.0kb upstream 1914 true Scaffold1952: 1-1914 Capsella grandiflora
Cagra.1952s0001 2.0kb upstream 2.0kb upstream 414 false Scaffold1952: 1-414 Capsella grandiflora
Cagra.1952s0001 2.0kb downstream 2.0kb downstream 3500 true Scaffold1952: 415-3914 Capsella grandiflora
Cagra.1952s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1952: 1915-3914 Capsella grandiflora
Cagra.1952s0001 5.0kb upstream 5.0kb upstream 1914 true Scaffold1952: 1-1914 Capsella grandiflora
Cagra.1952s0001 5.0kb upstream 5.0kb upstream 414 false Scaffold1952: 1-414 Capsella grandiflora
Cagra.1952s0001 5.0kb downstream 5.0kb downstream 6500 true Scaffold1952: 415-6914 Capsella grandiflora
Cagra.1952s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1952: 1915-6914 Capsella grandiflora
Cagra.1952s0001 10.0kb upstream 10.0kb upstream 1914 true Scaffold1952: 1-1914 Capsella grandiflora
Cagra.1952s0001 10.0kb upstream 10.0kb upstream 414 false Scaffold1952: 1-414 Capsella grandiflora
Cagra.1952s0001 10.0kb downstream 10.0kb downstream 11500 true Scaffold1952: 415-11914 Capsella grandiflora
Cagra.1952s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1952: 1915-11914 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378920 5261 Brassicaceae View MSA
123837030 5264 Brassicales-Malvales View MSA
124346986 5266 SBM View MSA
124246134 5268 Malvidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain