Gene : Cagra.1889s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22880:SF163 - TRANSCRIPTION FACTOR GTE1 Genomic Order:  18
Name:  ? Cagra.1889s0018 Secondary Identifier:  ? PAC:28908587
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0018 0.5kb upstream 0.5kb upstream 3787 true Scaffold1889: 64436-68222 Capsella grandiflora
Cagra.1889s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 67723-68222 Capsella grandiflora
Cagra.1889s0018 0.5kb downstream 0.5kb downstream 3787 true Scaffold1889: 63936-67722 Capsella grandiflora
Cagra.1889s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 63936-64435 Capsella grandiflora
Cagra.1889s0018 1.0kb upstream 1.0kb upstream 4287 true Scaffold1889: 64436-68722 Capsella grandiflora
Cagra.1889s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 67723-68722 Capsella grandiflora
Cagra.1889s0018 1.0kb downstream 1.0kb downstream 4287 true Scaffold1889: 63436-67722 Capsella grandiflora
Cagra.1889s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 63436-64435 Capsella grandiflora
Cagra.1889s0018 2.0kb upstream 2.0kb upstream 5287 true Scaffold1889: 64436-69722 Capsella grandiflora
Cagra.1889s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 67723-69722 Capsella grandiflora
Cagra.1889s0018 2.0kb downstream 2.0kb downstream 5287 true Scaffold1889: 62436-67722 Capsella grandiflora
Cagra.1889s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 62436-64435 Capsella grandiflora
Cagra.1889s0018 5.0kb upstream 5.0kb upstream 8287 true Scaffold1889: 64436-72722 Capsella grandiflora
Cagra.1889s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 67723-72722 Capsella grandiflora
Cagra.1889s0018 5.0kb downstream 5.0kb downstream 8287 true Scaffold1889: 59436-67722 Capsella grandiflora
Cagra.1889s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1889: 59436-64435 Capsella grandiflora
Cagra.1889s0018 10.0kb upstream 10.0kb upstream 13287 true Scaffold1889: 64436-77722 Capsella grandiflora
Cagra.1889s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 67723-77722 Capsella grandiflora
Cagra.1889s0018 10.0kb downstream 10.0kb downstream 13287 true Scaffold1889: 54436-67722 Capsella grandiflora
Cagra.1889s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1889: 54436-64435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373989 5261 Brassicaceae View MSA
123828813 5264 Brassicales-Malvales View MSA
124347054 5266 SBM View MSA
124244594 5268 Malvidae View MSA
124066243 5270 Rosid View MSA
123745671 5271 Pentapetalae View MSA
122792234 5272 Eudicot View MSA
122042971 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121343970 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain