Gene : Cagra.1838s0046 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24349//PTHR24349:SF90 - SERINE/THREONINE-PROTEIN KINASE Genomic Order:  46
Name:  ? Cagra.1838s0046 Secondary Identifier:  ? PAC:28918391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0046 0.5kb upstream 0.5kb upstream 3935 true Scaffold1838: 160509-164443 Capsella grandiflora
Cagra.1838s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 160509-161008 Capsella grandiflora
Cagra.1838s0046 0.5kb downstream 0.5kb downstream 3935 true Scaffold1838: 161009-164943 Capsella grandiflora
Cagra.1838s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 164444-164943 Capsella grandiflora
Cagra.1838s0046 1.0kb upstream 1.0kb upstream 4435 true Scaffold1838: 160009-164443 Capsella grandiflora
Cagra.1838s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 160009-161008 Capsella grandiflora
Cagra.1838s0046 1.0kb downstream 1.0kb downstream 4435 true Scaffold1838: 161009-165443 Capsella grandiflora
Cagra.1838s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 164444-165443 Capsella grandiflora
Cagra.1838s0046 2.0kb upstream 2.0kb upstream 5435 true Scaffold1838: 159009-164443 Capsella grandiflora
Cagra.1838s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 159009-161008 Capsella grandiflora
Cagra.1838s0046 2.0kb downstream 2.0kb downstream 5435 true Scaffold1838: 161009-166443 Capsella grandiflora
Cagra.1838s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 164444-166443 Capsella grandiflora
Cagra.1838s0046 5.0kb upstream 5.0kb upstream 8435 true Scaffold1838: 156009-164443 Capsella grandiflora
Cagra.1838s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 156009-161008 Capsella grandiflora
Cagra.1838s0046 5.0kb downstream 5.0kb downstream 8435 true Scaffold1838: 161009-169443 Capsella grandiflora
Cagra.1838s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 164444-169443 Capsella grandiflora
Cagra.1838s0046 10.0kb upstream 10.0kb upstream 13435 true Scaffold1838: 151009-164443 Capsella grandiflora
Cagra.1838s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 151009-161008 Capsella grandiflora
Cagra.1838s0046 10.0kb downstream 10.0kb downstream 13435 true Scaffold1838: 161009-174443 Capsella grandiflora
Cagra.1838s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 164444-174443 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372155 5261 Brassicaceae View MSA
123800308 5264 Brassicales-Malvales View MSA
124349712 5266 SBM View MSA
124239826 5268 Malvidae View MSA
124071018 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain